Parental gene: | RNF13, ENSPPYG00000014202 |
| Aliases: | None |
| Description: | E3 ubiquitin-protein ligase RNF13 precursor [Source:RefSeq peptide;Acc:NP_001125196] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 3:152632624..152799875(+) |
>ENSPPYG00000014202
ATGCTGCTCTCCATAGGGATGCTCATGCTGTCAGCCACACAAGTCTATACCATCTTGACTGTCCAGCTCTTTGCATTCTT
AAACCTACTGCCTGTAGAAGCAGACATTTTAGCATATAACTTTGAAAATGCATCTCAGACATTTGATGACCTCCCTGCAA
GATTTGGTTATAGACTTCCAGCTGAAGGTTTAAAGGGTTTTTTGATTAACTCAAAACCAGAGAATGCCTGTGAACCCATA
GTGCCTCCACCAGTAAAAGACAATTCATCTGGCACTTTCATTGTGTTAATTAGAAGACTTGATTGTAATTTTGATATAAA
GGTTTTAAATGCACAGAGAGCAGGATACAAGGCAGCCATAGTTCACAATGTTGATTCTGATGACCTCATTAGCATGGGAT
CCAACGACATTGAGGTACTAAAGAAAATTGACATTCCATCTGTCTTTATTGGTGAATCATCAGCTAATTCTCTGAAAGAT
GAATTCACATATGAAAAAGGGGGCCACCTTATCTTAGTTCCAGAATTTAGTCTTCCTTTGGAATACTACCTAATTCCCTT
CCTTATTATAGTGGGCATCTGTCTCATCTTGATAGTCATTTTCATGATCACAAAATTTGTCCAGGATAGACATAGAGCTA
GAAGAAACAGACTTCGTAAAGATCAACTTAAGAAACTTCCTGTACATAAATTCAAGAAAGGAGATGAGTATGATGTATGT
GCCATTTGTTTGGATGAGTATGAAGATGGAGACAAACTCAGAATCCTTCCCTGTTCCCATGCTTATCACTGCAAGTGTGT
AGACCCTTGGCTAACTAAAACCAAAAAAACCTGTCCAGTGTGCAAGCAAAAAGTTGTTCCTTCTCAAGGCGATTCAAACT
CTGACACAGATAGTAGTCAAGAAGAAAATGAAGTGACAGAACATACCCCTTTACTTAGACCTTTAGCTTCTGTCAGTGCC
CAGTCATTTGGGGCTTTATCAGAATCCCGCTCACATCAGAACATGACAGAATCTTCAGACTATGAGGAAGACGACAATGA
AGATACTGACAGTAGTGATGCAGAAAATGAAATTAATGAACATGATGTCGTGGTCCAGTTGCAGCCTAATGGTGAACGAG
ATTACAACATAGCAAATACTGTTTGA
ATGCTGCTCTCCATAGGGATGCTCATGCTGTCAGCCACACAAGTCTATACCATCTTGACTGTCCAGCTCTTTGCATTCTT
AAACCTACTGCCTGTAGAAGCAGACATTTTAGCATATAACTTTGAAAATGCATCTCAGACATTTGATGACCTCCCTGCAA
GATTTGGTTATAGACTTCCAGCTGAAGGTTTAAAGGGTTTTTTGATTAACTCAAAACCAGAGAATGCCTGTGAACCCATA
GTGCCTCCACCAGTAAAAGACAATTCATCTGGCACTTTCATTGTGTTAATTAGAAGACTTGATTGTAATTTTGATATAAA
GGTTTTAAATGCACAGAGAGCAGGATACAAGGCAGCCATAGTTCACAATGTTGATTCTGATGACCTCATTAGCATGGGAT
CCAACGACATTGAGGTACTAAAGAAAATTGACATTCCATCTGTCTTTATTGGTGAATCATCAGCTAATTCTCTGAAAGAT
GAATTCACATATGAAAAAGGGGGCCACCTTATCTTAGTTCCAGAATTTAGTCTTCCTTTGGAATACTACCTAATTCCCTT
CCTTATTATAGTGGGCATCTGTCTCATCTTGATAGTCATTTTCATGATCACAAAATTTGTCCAGGATAGACATAGAGCTA
GAAGAAACAGACTTCGTAAAGATCAACTTAAGAAACTTCCTGTACATAAATTCAAGAAAGGAGATGAGTATGATGTATGT
GCCATTTGTTTGGATGAGTATGAAGATGGAGACAAACTCAGAATCCTTCCCTGTTCCCATGCTTATCACTGCAAGTGTGT
AGACCCTTGGCTAACTAAAACCAAAAAAACCTGTCCAGTGTGCAAGCAAAAAGTTGTTCCTTCTCAAGGCGATTCAAACT
CTGACACAGATAGTAGTCAAGAAGAAAATGAAGTGACAGAACATACCCCTTTACTTAGACCTTTAGCTTCTGTCAGTGCC
CAGTCATTTGGGGCTTTATCAGAATCCCGCTCACATCAGAACATGACAGAATCTTCAGACTATGAGGAAGACGACAATGA
AGATACTGACAGTAGTGATGCAGAAAATGAAATTAATGAACATGATGTCGTGGTCCAGTTGCAGCCTAATGGTGAACGAG
ATTACAACATAGCAAATACTGTTTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 41 .74 RPM |
| SRP007412_cerebellum | 37 .33 RPM |
| SRP007412_heart | 18 .60 RPM |
| SRP007412_kidney | 54 .49 RPM |
| SRP007412_liver | 39 .60 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000010433 | ortholog_one2one | 1 retrogene | |
| Canis familiaris | ENSCAFG00000008370 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000014687 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000001221 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000003149 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_2392 | 90.21 | 50.92 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000014202 retrocopies