Parental gene: | NT5C2, ENSCAFG00000010354 |
| Aliases: | None |
| Description: | 5'-nucleotidase, cytosolic II [Source:HGNC Symbol;Acc:8022] |
| Organism: | Dog (Canis familiaris) |
| Coordinates: | 28:15526792..15605051(-) |
>ENSCAFG00000010354
ATGACAACCTCCTGGAGTGATCGGTTACAGAATGCAGCTGATATGCCTGCTAACATGGATAAACATTCCCTGAAAAAGTA
TCGACGAGAAGCCTATCATCGGGTGTTTGTGAACCGAAGTTTAGCCATGGAAAAAATAAAGTGTTTTGGTTTTGATATGG
ATTATACACTTGCTGTGTACAAGTCCCCGGAGTATGAGTCTCTTGGCTTTGAGCTTACTGTGGAGAGATTAGTTTCTATT
GGCTACCCTCAGGAACTGCTCAGCTTTGCTTATGATTCTACATTCCCTACCAGGGGACTTGTTTTTGATACACTATATGG
AAATCTTTTGAAAGTTGATGCATATGGAAATCTTTTGGTCTGTGCACATGGATTCAACTTCATAAGAGGACCAGAAACTA
GAGAGCAGTATCCAAATAAATTTATCCAGCGAGATGACACTGAAAGATTTTACATTTTGAACACACTATTCAACCTACCA
GAGACCTACCTGTTGGCCTGCCTTGTAGATTTTTTTACTAATTGTCCTAGATATACCAGCTGTGAAACAGGATTTAAAGA
TGGGGACCTCTTCATGTCTTACCGAAGTATGTTCCAGGATGTAAGAGATGCTGTCGACTGGGTTCATTACAAGGGTTCCC
TTAAGGAAAAGACAGTTGAAAATCTTGAGAAGTATGTAGTCAAAGATGGAAAACTGCCTTTGCTTTTGAGCCGAATGAAA
GAAGTAGGGAAAGTGTTTCTTGCCACCAACAGTGACTATAAATATACAGATAAAATTATGACTTACCTGTTTGATTTCCC
ACATGGCCCCAAGCCTGGGAGTTCCCATCGACCATGGCAGTCCTATTTTGACCTGATTTTGGTGGATGCACGGAAGCCAC
TCTTTTTTGGAGAAGGCACTGTACTGCGTCAGGTGGATACTAAAACTGGCAAGCTGAAAATTGGTACCTACACAGGGCCC
TTACAGCATGGCATCGTCTACTCAGGAGGTTCATCAGATACAGTCTGTGATCTCTTGGGAGCCAAGGGCAAAGATATTTT
GTATATTGGAGATCACATTTTTGGAGACATTTTAAAATCAAAGAAACGGCAAGGGTGGCGAACTTTCTTGGTGATTCCTG
AACTTGCACAGGAGCTGCATGTCTGGACTGATAAGAGTGCACTTTTCGAAGAGCTTCAGAGCTTGGATATTTTCTTGGCT
GAACTCTACAAGCATCTTGACAGCAGCAGCAATGAGCGCCCAGACATTAGTTCCATTCAGAGACGTATTAAGAAAGTAAC
TCATGACATGGACATGTGCTATGGGATGATGGGAAGCCTGTTTCGCAGTGGCTCCCGACAGACCCTCTTTGCCAGTCAGG
TGATGCGATATGCTGATCTCTATGCAGCATCTTTCATCAACCTGCTGTATTATCCATTCAGCTACCTCTTCAGAGCTGCT
CATGTCTTGATGCCTCATGAATCAACGGTGGAACACACACATGTAGATATCAATGAGATGGAGTCCCCTCTTGCCACCCG
GAACCGCACATCAGTTGATTTCAAAGATACCGACTATAAGCGGCACCAGTTGACCCGGTCGATTAGTGAGATTAAACCCC
CCAACCTCTTCCCACTGGCCCCCCAGGAAATTACACACTGCCATGATGAAGATGATGATGAGGAAGAGGAAGAGGAAGAA
GAA
ATGACAACCTCCTGGAGTGATCGGTTACAGAATGCAGCTGATATGCCTGCTAACATGGATAAACATTCCCTGAAAAAGTA
TCGACGAGAAGCCTATCATCGGGTGTTTGTGAACCGAAGTTTAGCCATGGAAAAAATAAAGTGTTTTGGTTTTGATATGG
ATTATACACTTGCTGTGTACAAGTCCCCGGAGTATGAGTCTCTTGGCTTTGAGCTTACTGTGGAGAGATTAGTTTCTATT
GGCTACCCTCAGGAACTGCTCAGCTTTGCTTATGATTCTACATTCCCTACCAGGGGACTTGTTTTTGATACACTATATGG
AAATCTTTTGAAAGTTGATGCATATGGAAATCTTTTGGTCTGTGCACATGGATTCAACTTCATAAGAGGACCAGAAACTA
GAGAGCAGTATCCAAATAAATTTATCCAGCGAGATGACACTGAAAGATTTTACATTTTGAACACACTATTCAACCTACCA
GAGACCTACCTGTTGGCCTGCCTTGTAGATTTTTTTACTAATTGTCCTAGATATACCAGCTGTGAAACAGGATTTAAAGA
TGGGGACCTCTTCATGTCTTACCGAAGTATGTTCCAGGATGTAAGAGATGCTGTCGACTGGGTTCATTACAAGGGTTCCC
TTAAGGAAAAGACAGTTGAAAATCTTGAGAAGTATGTAGTCAAAGATGGAAAACTGCCTTTGCTTTTGAGCCGAATGAAA
GAAGTAGGGAAAGTGTTTCTTGCCACCAACAGTGACTATAAATATACAGATAAAATTATGACTTACCTGTTTGATTTCCC
ACATGGCCCCAAGCCTGGGAGTTCCCATCGACCATGGCAGTCCTATTTTGACCTGATTTTGGTGGATGCACGGAAGCCAC
TCTTTTTTGGAGAAGGCACTGTACTGCGTCAGGTGGATACTAAAACTGGCAAGCTGAAAATTGGTACCTACACAGGGCCC
TTACAGCATGGCATCGTCTACTCAGGAGGTTCATCAGATACAGTCTGTGATCTCTTGGGAGCCAAGGGCAAAGATATTTT
GTATATTGGAGATCACATTTTTGGAGACATTTTAAAATCAAAGAAACGGCAAGGGTGGCGAACTTTCTTGGTGATTCCTG
AACTTGCACAGGAGCTGCATGTCTGGACTGATAAGAGTGCACTTTTCGAAGAGCTTCAGAGCTTGGATATTTTCTTGGCT
GAACTCTACAAGCATCTTGACAGCAGCAGCAATGAGCGCCCAGACATTAGTTCCATTCAGAGACGTATTAAGAAAGTAAC
TCATGACATGGACATGTGCTATGGGATGATGGGAAGCCTGTTTCGCAGTGGCTCCCGACAGACCCTCTTTGCCAGTCAGG
TGATGCGATATGCTGATCTCTATGCAGCATCTTTCATCAACCTGCTGTATTATCCATTCAGCTACCTCTTCAGAGCTGCT
CATGTCTTGATGCCTCATGAATCAACGGTGGAACACACACATGTAGATATCAATGAGATGGAGTCCCCTCTTGCCACCCG
GAACCGCACATCAGTTGATTTCAAAGATACCGACTATAAGCGGCACCAGTTGACCCGGTCGATTAGTGAGATTAAACCCC
CCAACCTCTTCCCACTGGCCCCCCAGGAAATTACACACTGCCATGATGAAGATGATGATGAGGAAGAGGAAGAGGAAGAA
GAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 29 .38 RPM |
| SRP017611_kidney | 69 .87 RPM |
| SRP017611_liver | 29 .01 RPM |
| SRP012049_cerebellum | 40 .28 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000009184 | within_species_paralog | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000004098 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000012316 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000020179 | ortholog_one2many | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000017707 | ortholog_one2one | 4 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cfam_684 | 96.17 | 50.98 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCAFG00000010354 retrocopies