Parental gene: | Nt5c2, ENSRNOG00000020179 |
| Aliases: | None |
| Description: | None |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 1:274089442..274123321(-) |
>ENSRNOG00000020179
TTTTATAGGGTGTTTGTGAACCGAAGTTTAGCCATGGAAAAAATAAAGTGTTTTGGGTTTGACATGGATTATACCCTGGC
TGTGTACAAGTCTCCGGAATATGAATCCCTTGGCTTTGAGCTTACTGTGGAGAGATTAGTGTCCATCGGCTATCCTCAGG
AGCTGCTCAACTTTGCATATGATTCGACATTCCCTACCAGAGGACTTGTCTTTGACACACTCTATGGAAATCTCTTGAAA
GTTGATGCCTATGGAAACCTCTTGGTTTGTGCACATGGATTTAACTTCATAAGAGGACCAGAAACTAGAGAGCAGTATCC
AAATAAGTTTATCCAACGAGATGATACTGAACGGTTTTACATTCTGAACACACTCTTCAACCTTCCAGAAACCTACCTGT
TGGCCTGCCTAGTAGATTTTTTTACTAATTGTCCCAGATATACCAGTTGTGACACAGGATTTAAAGATGGGGACCTCTTC
ATGTCCTACAGGAGTATGTTCCAGGATGTAAGGGACGCAGTGGACTGGGTCCATTACAAGGGTTCCCTTAAGGAAAAGAC
AGTTGAAAATCTTGAGAAGTATGTAGTCAAAGATGGCAAGTTGCCGTTGCTTCTGAGCCGAATGAAGGAAGTGGGGAAAG
TGTTTCTGGCCACTAACAGTGACTATAAGTACACAGATAAAATCATGACTTACCTGTTTGATTTCCCACATGGCCCCAAG
CCTGGGAGCTCCCACCGGCCGTGGCAGTCCTACTTTGATCTGATTTTGGTGGATGCACGGAAACCGCTCTTTTTTGGAGA
AGGCACAGTGCTGCGTCAGGTGGACACTAAAACCGGAAAACTGAAAATCGGCACCTACACGGGCCCCCTGCAGCATGGCA
TCGTCTACTCAGGAGGTTCATCTGATACAATCTGTGACCTGTTGGGAGCTAAGGGCAAAGACATTTTGTATATTGGAGAT
CACATTTTTGGAGACATTTTGAAGTCAAAGAAACGGCAAGGGTGGAGAACTTTCTTGGTGATTCCTGAGCTTGCACAAGA
GCTGCACGTCTGGACTGACAAAAGTTCACTTTTTGAAGAACTTCAAAGCTTGGATATTTTCTTGGCTGAACTCTACAAGC
ACCTGGACAGCAGCAGCAACGAGCGCCCAGACATCAGTTCCATCCAGAGACGGATCAAGAAAGTGACTCATGACATGGAC
ATGTGCTACGGGATGATGGGAAGCCTGTTCCGCAGTGGCTCCCGGCAGACGCTCTTTGCCAGCCAAGTGATGCGGTACGC
TGACCTCTATGCAGCATCCTTCATCAACCTGCTGTACTACCCATTCAGCTACCTCTTCAGAGCGGCCCACGTCCTGATGC
CGCACGAATCAACAGTGGAGCACACACATGTGGATATCAATGAGATGGAGTCCCCTCTCGCCACCCGCAACCGCACATCG
GTGGATTTCAAAGACACTGACTATAAGCGACACCAGCTCACGAGGTCCATTAGTGAGATCAAGCCTCCCAACCTCTTCCC
TCTGGCTCCCCAGGAGATCACACACTGCCATGATGAAGATGATGATGAGGAAGAGGAAGAGGAAGAATAA
TTTTATAGGGTGTTTGTGAACCGAAGTTTAGCCATGGAAAAAATAAAGTGTTTTGGGTTTGACATGGATTATACCCTGGC
TGTGTACAAGTCTCCGGAATATGAATCCCTTGGCTTTGAGCTTACTGTGGAGAGATTAGTGTCCATCGGCTATCCTCAGG
AGCTGCTCAACTTTGCATATGATTCGACATTCCCTACCAGAGGACTTGTCTTTGACACACTCTATGGAAATCTCTTGAAA
GTTGATGCCTATGGAAACCTCTTGGTTTGTGCACATGGATTTAACTTCATAAGAGGACCAGAAACTAGAGAGCAGTATCC
AAATAAGTTTATCCAACGAGATGATACTGAACGGTTTTACATTCTGAACACACTCTTCAACCTTCCAGAAACCTACCTGT
TGGCCTGCCTAGTAGATTTTTTTACTAATTGTCCCAGATATACCAGTTGTGACACAGGATTTAAAGATGGGGACCTCTTC
ATGTCCTACAGGAGTATGTTCCAGGATGTAAGGGACGCAGTGGACTGGGTCCATTACAAGGGTTCCCTTAAGGAAAAGAC
AGTTGAAAATCTTGAGAAGTATGTAGTCAAAGATGGCAAGTTGCCGTTGCTTCTGAGCCGAATGAAGGAAGTGGGGAAAG
TGTTTCTGGCCACTAACAGTGACTATAAGTACACAGATAAAATCATGACTTACCTGTTTGATTTCCCACATGGCCCCAAG
CCTGGGAGCTCCCACCGGCCGTGGCAGTCCTACTTTGATCTGATTTTGGTGGATGCACGGAAACCGCTCTTTTTTGGAGA
AGGCACAGTGCTGCGTCAGGTGGACACTAAAACCGGAAAACTGAAAATCGGCACCTACACGGGCCCCCTGCAGCATGGCA
TCGTCTACTCAGGAGGTTCATCTGATACAATCTGTGACCTGTTGGGAGCTAAGGGCAAAGACATTTTGTATATTGGAGAT
CACATTTTTGGAGACATTTTGAAGTCAAAGAAACGGCAAGGGTGGAGAACTTTCTTGGTGATTCCTGAGCTTGCACAAGA
GCTGCACGTCTGGACTGACAAAAGTTCACTTTTTGAAGAACTTCAAAGCTTGGATATTTTCTTGGCTGAACTCTACAAGC
ACCTGGACAGCAGCAGCAACGAGCGCCCAGACATCAGTTCCATCCAGAGACGGATCAAGAAAGTGACTCATGACATGGAC
ATGTGCTACGGGATGATGGGAAGCCTGTTCCGCAGTGGCTCCCGGCAGACGCTCTTTGCCAGCCAAGTGATGCGGTACGC
TGACCTCTATGCAGCATCCTTCATCAACCTGCTGTACTACCCATTCAGCTACCTCTTCAGAGCGGCCCACGTCCTGATGC
CGCACGAATCAACAGTGGAGCACACACATGTGGATATCAATGAGATGGAGTCCCCTCTCGCCACCCGCAACCGCACATCG
GTGGATTTCAAAGACACTGACTATAAGCGACACCAGCTCACGAGGTCCATTAGTGAGATCAAGCCTCCCAACCTCTTCCC
TCTGGCTCCCCAGGAGATCACACACTGCCATGATGAAGATGATGATGAGGAAGAGGAAGAGGAAGAATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 22 .26 RPM |
| SRP017611_kidney | 90 .30 RPM |
| SRP017611_brain | 35 .44 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000010354 | ortholog_one2many | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000004098 | ortholog_one2many | 1 retrogene | |
| Microcebus murinus | ENSMICG00000012316 | ortholog_one2many | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000017707 | ortholog_one2many | 4 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_430 | 90.07 | 53.12 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000020179 retrocopies