Parental gene:

ENSCAFG00000010412

Aliases:None
Description:None
Organism:Dog (Canis familiaris)
Coordinates:7:302515..309630(+)


>ENSCAFG00000010412
ATGAAGACAGCGGGAACCACCGTTTGGCCTAGAGCACGGGCCGGCCTGGAAAGGGAGCCCAGGCTTCTGGGTTTCAGACC
CTGTAACTCACTGCTAGGCCTCAGGCCTTGGAGAGGAAAGATAAAAGGATGCATCCGGGGCCTTTCCTGGCCCCACCTGG
CTCCCTCCTGCATTCACACCGCCTCACGGCTCGGCTTCCCCCAACAGCACGAGTGTATCTCCATCCACGTGGGCCAGGCG
GGCGTGCAGATGGGCAATACCTGCTGGGAGCTCTACTGCCTGGAGCACAGCATCCAGCCCAACGGCACCATGCCCAGTGA
CAAGGCACTGGGCAGCGGCAATGACTCCTTCAACACCTTCTTCAGCGAGACAGGGGCTGGCAAGCACGTGCCCCGGGCCA
TCTTTGTGGACCTAGAGCCCACGGTCATAGATGGGGTGAGAACTGGCACGTACAGGCAGCTCTTCCACCCTGAGCAGCTG
ATCTCTGGCAAGGAAGATGCTGCCAACAACTACGCCCGAGGCCACTACATGGTGGGGAAGGAGATCATCGATCTTGTGCT
GGAGCGGATCCGAAAACTGACAGACCAGTGCACTGGGCTCCAGGGCTTCCTCATCTTCCACAGCTTCGGGGGTGGCACCG
GTTCAGGCTTCACCTCCCTGCTGATGGAGCGGCTCTCCATGGACTACGGCAAGAAGTCCAAGCTGGAGTTTGCCATCTAC
CCCGCTCCGCAAATGTCCACCGCGGTCGTAGAGCCCTACAACTCCATCCTGACCACCCACACCACCCTGGAGCACTCGGA
CTGCACCTTCATGGTGGACAACGAGGCCATCTACGACATCTGCCGCAACCTGGACATCGAGCGCCCCACCTACACCAACG
TCAACCAGCTCATCGGTCAGATCGTGTCCTCCATCACCGCCTCCCTGCGCTTCAACGGGGCCCTCAACGTGGACCTCACG
GAGTTCCAGACCAACCTGGTGCCATACCCCCGCATCCACTTCCCCCTGGTGACCTACTCCCCCATTGTGTCAGCCGAGAA
GGCCTACCACGAGCAACTGTCAGTGGCAGAGATCACCAACGCCTGCTTTGAATCCTCCAACCACATGGTCAAGTGCGACC
CTCGCCATGGCAAATACATGGCCTGCTGCATGCTCTACCAGGGAGAGGTGGTGCCCAAGGACGTGAACGCCGCCATCGCC
ACCATCAAGACCAAGCACTCCATCCAGTTTGTGGACTGGTGTCCCACGGGCTTCAAGGTTGGCATCAACTACCAGCCGCC
CACCGTGGTGCCCGGGGGCGACCTGGCCAAGGTGCAGCAGGCAGTCTGCATGCTGAGCAACACCACCGCCATCGCCGAGG
CCTGGGCCCGCCTTAACCACAAGTTTGACCTGATGTATGCCAAGCGGGCGTTTGTGCACTGGTACGTGGGCGAGGGCATG
GAGGAAGGAGAGTTCCTGGAGGCCCGAGAGGACCTGGCTGCCCTGGAGAAGGATTATGAAGAAATGGGAGCGGAGTCGGT
GGACAGTGAGGACGAGAACAAGGAGTTCTAG

Library Parental gene expression (RPM)
SRP017611_brain 0 .24 RPM
SRP017611_kidney 11 .56 RPM
SRP017611_liver 0 .00 RPM
SRP012049_cerebellum 7 .90 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000005248 within_species_paralog 1 retrogene
retro_cfam_1124,
Canis familiaris ENSCAFG00000008640 other_paralog 8 retrogenes
retro_cfam_1481, retro_cfam_1751, retro_cfam_1895, retro_cfam_1917, retro_cfam_1979, retro_cfam_2000, retro_cfam_463, retro_cfam_926,
Canis familiaris ENSCAFG00000008661 other_paralog 2 retrogenes
retro_cfam_960, retro_cfam_978,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_1418 66.17 77.71
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Download FASTA sequences of all ENSCAFG00000010412 retrocopies