Parental gene:

PPA2, ENSCAFG00000010887

Aliases:None
Description:pyrophosphatase (inorganic) 2 [Source:HGNC Symbol;Acc:28883]
Organism:Dog (Canis familiaris)
Coordinates:32:26250166..26314975(-)


>ENSCAFG00000010887
CTGCTGCCGCTCCTGCCGCTCCTGCGCACGGGCTGGGGCTGGCGCGCGGGGCCCCCCGCTGCCGCCCGCGCGCCCCGGGG
AGCGCGCGCAGGGCCTGGCCCGCACCGCGCCATGGCCTCGTACCGCACGGAGGAGCGCGGCCGGCCCCGCTCACCCGGGT
ACCGCCTCTTCTTCCAGAATGTAGCTGGTCACTACATTTCCCCCTTTCATGATATTCCTCTGAAGGTGGACTCAACAGAG
GAAAATGGCATTCCTACAAAGAGAGCACGAAGTGATGAGTATGAGAATTTGTTTAATATGGTTGTAGAAGTACCTCGGTG
GACAAATGCTAAAATGGAGATTGCCACAAAGGAGCCTTTGAATCCCATTAAACAAGATATAAAGGATGGCAAGCTACGCT
ACGTGGCAAATATCTTCCCTCACAAGGGTTATATTTGGAATTATGGTGCCCTCCCACAGACTTGGGAAGATCCCCATCGA
AAAGATAAGAGTACAGACTGCTGTGGAGATAATGATCCTATTGATGTTTGTGAAATAGGCTCAAAGGTTCTTTCTTGTGG
AGAGGTTATTCCTGTGAAGATCCTTGGAATTTTGGCTCTTATTGATCAGGGTGAAACAGATTGGAAAATAATTGCTATCA
ATGTGAATGATCCTGAAGCCTCAAAGTTTCATGATATTGATGATGTTAAGAAGTACAAACCAGGTTACTTGGAAGCTACG
CTTAATTGGTTTAGATTTTATAAGGTGCCAGAAGGAAAACCAGAAAACCAGTTTGCTTTTAATGGAGAATTCAAAAACAA
GGCTTTTGCTCTTGATGTTATTAAATCTACTCATGAATGCTGGAAAGCATTGCTTATGAAGAAGTGTGATGGAGGAGCTA
TAAAGTGCACAAATGTGCATATATGTGACAGCCCTTTCCATTGCACTCAAGAGGAAGCAAGATCAATAGTTGAACTGGTA
AGGGGCAAATATTTAAAGCATCCTTTAATCTTACAAACGTCATGGGGAACTCTGGCAGAA

Library Parental gene expression (RPM)
SRP017611_brain 10 .80 RPM
SRP017611_kidney 68 .61 RPM
SRP017611_liver 5 .87 RPM
SRP012049_cerebellum 7 .14 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000014033 within_species_paralog 1 retrogene
retro_cfam_1040,
Choloepus hoffmanni ENSCHOG00000008731 ortholog_one2one 3 retrogenes
retro_chof_1052, retro_chof_430, retro_chof_769,
Echinops telfairi ENSETEG00000014816 ortholog_one2one 1 retrogene
retro_etel_1959,
Macaca mulatta ENSMMUG00000017004 ortholog_one2one 1 retrogene
retro_mmul_1278,
Monodelphis domestica ENSMODG00000020635 ortholog_one2one 5 retrogenes
retro_mdom_638, retro_mdom_795, retro_mdom_945, retro_mdom_946, retro_mdom_947,
Oryctolagus cuniculus ENSOCUG00000005941 ortholog_one2many 2 retrogenes
retro_ocun_1338, retro_ocun_1470,
Ochotona princeps ENSOPRG00000007086 ortholog_one2one 1 retrogene
retro_opri_847,
Sus scrofa ENSSSCG00000022365 ortholog_one2one 1 retrogene
retro_sscr_557,
Tursiops truncatus ENSTTRG00000003141 ortholog_one2one 2 retrogenes
retro_ttru_1307, retro_ttru_606,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_405 94.20 85.88
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Download FASTA sequences of all ENSCAFG00000010887 retrocopies