Parental gene: | PPA1, ENSCAFG00000014033 |
| Aliases: | None |
| Description: | pyrophosphatase (inorganic) 1 [Source:HGNC Symbol;Acc:9226] |
| Organism: | Dog (Canis familiaris) |
| Coordinates: | 4:21132549..21181653(-) |
>ENSCAFG00000014033
NNCAGCGAGGAGCGCGCCGCGCCCACGCTCGAGTACCGAGCCTTCCTCAAAAATGAAAAAGGACAATATATATCTCCATT
TCATGATGTTCCAATTTATGCAGATAAGGACGTTTTCCACATGGTAGTTGAAGTACCACGCTGGTCTAATGCAAAAATGG
AGATAGCTACAAAAGACCCTCTAAACCCAATTAAACAAGATGTGAAGAAAGGAAAACTCCGTTATGTTGCAAATTTGTTC
CCTTATAAAGGATATATCTGGAACTATGGTGCCATCCCTCAGACTTGGGAAGACCCAGGACACAATGACAAACATACTGG
CTGTTGTGGTGACAATGACCCCATCGATGTGTGTGAAATTGGAAGTAAGGTATGTGCAAGAGGTGAAATAATTAGGGTGA
AAGTTCTGGGCATACTGGCTATGATTGATGAAGGAGAAACTGACTGGAAAGTCATTGCCATTAATGTGGATGATCCTGAT
GCAGCCAATTACAATGATATTAATGATGTCAAGCGGCTGAAACCTGGCTACCTGGAAGCTACTGTGGACTGGTTTAGAAG
GTACAAGGTTCCTGATGGAAAACCAGAGAATCAGTTTGCTTTCAATGCAGAATTTAAAGATAAGGATTTTGCAATGGATA
TTATTAAAAGCACTCATGACCATTGGAGAGCATTAGTGACGAAGAAAATCGATGGAAAGGGAATCAGTTGCATGAATACT
ACGGTGTCTGAGAGCCCCTTCAAGTGTGATCCTGATGCTGCCAAAGCTATTGTGGATGCTTTACCGCCACCATGCGAATC
TGCCTGCACAGTACCAACAGATGTGGATAAGTGGTTCCATCACCAGAAAAAC
NNCAGCGAGGAGCGCGCCGCGCCCACGCTCGAGTACCGAGCCTTCCTCAAAAATGAAAAAGGACAATATATATCTCCATT
TCATGATGTTCCAATTTATGCAGATAAGGACGTTTTCCACATGGTAGTTGAAGTACCACGCTGGTCTAATGCAAAAATGG
AGATAGCTACAAAAGACCCTCTAAACCCAATTAAACAAGATGTGAAGAAAGGAAAACTCCGTTATGTTGCAAATTTGTTC
CCTTATAAAGGATATATCTGGAACTATGGTGCCATCCCTCAGACTTGGGAAGACCCAGGACACAATGACAAACATACTGG
CTGTTGTGGTGACAATGACCCCATCGATGTGTGTGAAATTGGAAGTAAGGTATGTGCAAGAGGTGAAATAATTAGGGTGA
AAGTTCTGGGCATACTGGCTATGATTGATGAAGGAGAAACTGACTGGAAAGTCATTGCCATTAATGTGGATGATCCTGAT
GCAGCCAATTACAATGATATTAATGATGTCAAGCGGCTGAAACCTGGCTACCTGGAAGCTACTGTGGACTGGTTTAGAAG
GTACAAGGTTCCTGATGGAAAACCAGAGAATCAGTTTGCTTTCAATGCAGAATTTAAAGATAAGGATTTTGCAATGGATA
TTATTAAAAGCACTCATGACCATTGGAGAGCATTAGTGACGAAGAAAATCGATGGAAAGGGAATCAGTTGCATGAATACT
ACGGTGTCTGAGAGCCCCTTCAAGTGTGATCCTGATGCTGCCAAAGCTATTGTGGATGCTTTACCGCCACCATGCGAATC
TGCCTGCACAGTACCAACAGATGTGGATAAGTGGTTCCATCACCAGAAAAAC
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 72 .49 RPM |
| SRP017611_kidney | 55 .80 RPM |
| SRP017611_liver | 48 .22 RPM |
| SRP012049_cerebellum | 29 .86 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000010887 | within_species_paralog | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000014861 | ortholog_one2one | 1 retrogene | |
| Equus caballus | ENSECAG00000018686 | ortholog_one2one | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000004048 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000016098 | ortholog_one2one | 1 retrogene | |
| Procavia capensis | ENSPCAG00000006788 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000029405 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cfam_1040 | 86.06 | 99.65 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCAFG00000014033 retrocopies