Parental gene: | PDCD6, ENSCAFG00000011044 |
| Aliases: | None |
| Description: | programmed cell death 6 [Source:HGNC Symbol;Acc:8765] |
| Organism: | Dog (Canis familiaris) |
| Coordinates: | 34:11910119..11929648(-) |
>ENSCAFG00000011044
ATGGCCGCCTACTCCTACCGCCCGGGGCCCGGGGCTGGCCCGGCCGGGGGCGCGGCGCTGCCGGACCAGAGCTTCTTGTG
GAACGTTTTCCAGAGGGTTGATAAAGACAGGAGCGGGGTGATATCAGACAACGAGCTTCAGCAAGCACTCTCCAACGGCA
CATGGACTCCATTTAATCCAGTGACTGTCCGCTCCATCATATCTATGTTTGACCGAGAGAACAAAGCTGGCGTGAACTTT
AGCGAGTTCACTGGCGTCTGGAAGTACATCACAGATTGGCAGAATGTCTTCCGCACCTACGACAGGGACAACTCTGGGAT
GATCGACAAGAACGAGCTCAAGCAAGCACTCTCAGGTTTTGGGTACCGGCTCTCTGACCAGTTTCATGACATCCTCATTC
GCAAGTTTGACAGACAAGGACGGGGGCAGATTGCATTTGATGACTTCATCCAGGGCTGCATTGTCTTGCAGAGGTTGACA
GATATATTCAGGCGTTACGATACGGATCAAGACGGCTGGATTCAGGTGTCATATGAACAGTATCTGTCCATGGTCTTCAG
CATCGTATAA
ATGGCCGCCTACTCCTACCGCCCGGGGCCCGGGGCTGGCCCGGCCGGGGGCGCGGCGCTGCCGGACCAGAGCTTCTTGTG
GAACGTTTTCCAGAGGGTTGATAAAGACAGGAGCGGGGTGATATCAGACAACGAGCTTCAGCAAGCACTCTCCAACGGCA
CATGGACTCCATTTAATCCAGTGACTGTCCGCTCCATCATATCTATGTTTGACCGAGAGAACAAAGCTGGCGTGAACTTT
AGCGAGTTCACTGGCGTCTGGAAGTACATCACAGATTGGCAGAATGTCTTCCGCACCTACGACAGGGACAACTCTGGGAT
GATCGACAAGAACGAGCTCAAGCAAGCACTCTCAGGTTTTGGGTACCGGCTCTCTGACCAGTTTCATGACATCCTCATTC
GCAAGTTTGACAGACAAGGACGGGGGCAGATTGCATTTGATGACTTCATCCAGGGCTGCATTGTCTTGCAGAGGTTGACA
GATATATTCAGGCGTTACGATACGGATCAAGACGGCTGGATTCAGGTGTCATATGAACAGTATCTGTCCATGGTCTTCAG
CATCGTATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 33 .27 RPM |
| SRP017611_kidney | 52 .04 RPM |
| SRP017611_liver | 9 .14 RPM |
| SRP012049_cerebellum | 27 .34 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000008464 | ortholog_one2one | 1 retrogene | |
| Canis familiaris | ENSCAFG00000001855 | within_species_paralog | 1 retrogene | |
| Felis catus | ENSFCAG00000025521 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000014485 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cfam_1289 | 71.54 | 64.02 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cfam_1695 | 93.65 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCAFG00000011044 retrocopies