Parental gene:

SRI, ENSCAFG00000001855

Aliases:None
Description:sorcin [Source:HGNC Symbol;Acc:11292]
Organism:Dog (Canis familiaris)
Coordinates:14:14260112..14275207(-)


>ENSCAFG00000001855
ATGGCGTACCCGGGGCACCCTGGCGCCGGCGGCGGGTACTACCCGGGCGGGGTAAGTGGAGCCCGCGCGCGCTTGCGGTC
GGGCCGCGGCCCCGGGGCCCCGTGGACGCCGGGAGGCCGCCCTGGGCCGCTCCGCGGGGCGGTGCCTCGCCGCAGGCCCT
TGCCGGATCCGCTCTATGGTTACTTTGCTGCCGTAGCTGGACAGGATGGGCAAATAGATGCTGATGAATTGCAGAGATGC
CTGACACAGTCAGGCATTGCTGGAGGATACAAACCTTTTAACCTGGAGACTTGTCGGCTTATGGTTTCAATGCTGGATAG
AGATATGTCAGGCACAATGGGTTTCAATGAATTTAAAGAACTCTGGGCTGTGCTGAATGGCTGGAGACAACACTTCATCA
GTTTTGACAGTGATCGGAGTGGAACAGTGGATCCTCAAGAACTGCAGAAGGCCTTGACCACAATGGGTTTTCGTTTGAGT
CCCCAGGCTGTGAATTCAATTGCAAAACGATACAGCACCAATGGCAAGATTACCTTTGATGACTACATCGCCTGCTGTGT
CAAACTGCGAGCCCTGACAGACAGCTTTCGAAGACGGGATACTGCTCAGCAAGGTGTTGTGAATTTCCCATATGATGATT
TCATCCAGTGTGTCATGAGCGTTTAA

Library Parental gene expression (RPM)
SRP017611_brain 40 .01 RPM
SRP017611_kidney 55 .14 RPM
SRP017611_liver 20 .38 RPM
SRP012049_cerebellum 47 .75 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000011044 within_species_paralog 2 retrogenes
retro_cfam_1289, retro_cfam_1695,
Cavia porcellus ENSCPOG00000010096 ortholog_one2one 1 retrogene
retro_cpor_216,
Latimeria chalumnae ENSLACG00000000210 ortholog_one2one 1 retrogene
retro_lcha_89,
Loxodonta africana ENSLAFG00000027380 ortholog_one2one 2 retrogenes
retro_lafr_1186, retro_lafr_487,
Monodelphis domestica ENSMODG00000010355 ortholog_one2one 1 retrogene
retro_mdom_782,
Mustela putorius furo ENSMPUG00000018313 ortholog_one2one 1 retrogene
retro_mputfur_1147,
Pteropus vampyrus ENSPVAG00000007438 ortholog_one2one 2 retrogenes
retro_pvam_1112, retro_pvam_734,
Rattus norvegicus ENSRNOG00000049780 ortholog_one2one 1 retrogene
retro_rnor_1237,
Ictidomys tridecemlineatus ENSSTOG00000004372 ortholog_one2one 1 retrogene
retro_itri_607,
Tupaia belangeri ENSTBEG00000004434 ortholog_one2one 1 retrogene
retro_tbel_4493,
Tarsius syrichta ENSTSYG00000014640 ortholog_one2many 1 retrogene
retro_tsyr_1832,
Xenopus tropicalis ENSXETG00000008793 ortholog_one2one 1 retrogene
retro_xtro_25,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_498 74.43 55.41
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Download FASTA sequences of all ENSCAFG00000001855 retrocopies