Parental gene:

Pdcd6, ENSRNOG00000014485

Aliases:None
Description:programmed cell death protein 6 [Source:RefSeq peptide;Acc:NP_001100922]
Organism:Rat (Rattus norvegicus)
Coordinates:1:33002330..33017997(+)


>ENSRNOG00000014485
ATGGCTGCCTACTCCTACCGCCCAGGCCCAGGTGCTGGCCCTGGCCCTGCTGCTGGAGCTGCACTGCCAGACCAGAGCTT
CCTGTGGAACGTCTTCCAGCGGGTTGATAAAGACAGGAGCGGAGTGATTTCAGACAATGAACTTCAGCAAGCATTATCCA
ATGGTACATGGACTCCGTTTAATCCAGTGACTGTGAGGTCAATCATTTCTATGTTTGACCGAGAAAACAAGGCTGGTGTG
AACTTCAGTGAATTCACAGGTGTGTGGAAGTATATCACAGACTGGCAGAATGTCTTCCGGACCTACGACAGGGACAACTC
TGGGATGATTGACAAGCATGAGCTCAAACAAGCACTCTCAGGTTTTGGCTACCGGCTCTCTGATCAGTTCCATGACATCC
TCATCCGAAAATTTGACAGGCAAGGACGAGGGCAGATCGCGTTCGATGACTTCATCCAGGGCTGCATCGTCTTGCAGAGG
TTGACAGACATATTCAGACGCTATGACACGGATCAGGATGGCTGGATTCAGGTGTCTTACGAGCAGTATCTCTCCATGGT
TTTCAGCATTGTATAA

Library Parental gene expression (RPM)
SRP017611_liver 19 .57 RPM
SRP017611_kidney 43 .96 RPM
SRP017611_brain 30 .27 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000008464 ortholog_one2one 1 retrogene
retro_amel_498,
Canis familiaris ENSCAFG00000011044 ortholog_one2one 2 retrogenes
retro_cfam_1289, retro_cfam_1695,
Felis catus ENSFCAG00000025521 ortholog_one2one 1 retrogene
retro_fcat_1800,
Rattus norvegicus ENSRNOG00000013972 within_species_paralog 2 retrogenes
retro_rnor_1563, retro_rnor_2505,
Rattus norvegicus ENSRNOG00000049780 within_species_paralog 1 retrogene
retro_rnor_1237,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_2840 80.34 60.73
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Download FASTA sequences of all ENSRNOG00000014485 retrocopies