Parental gene: | COX10, ENSCAFG00000017899 |
| Aliases: | None |
| Description: | cytochrome c oxidase assembly homolog 10 (yeast) [Source:HGNC Symbol;Acc:2260] |
| Organism: | Dog (Canis familiaris) |
| Coordinates: | 5:37853612..37982488(+) |
>ENSCAFG00000017899
ATGGCCGCGTCCCCGCACACTCTTTCCTCACGCCTCCTGACAGGATGTGCCTGGTATCTAGAGAGAAGAGCTGTGCAGGA
GGCCCCTCACACGTTCATGCATCTTTTCAGGAGCATCAACAGGCGGTGGATTACATTTCAGCACTTTACCTTCCTCAAGC
GCATGTATGTCACACAACTGAACAGAAGCCTCAACCAGCAAGTGAAACGGAAGCCAGAACCTGTGGCATTGCCTTTCCTT
GAGAAAACGTCTTTGGGTCAGGCCAAAGCAGAAATCTGTGAAATGAGACCTCTTCCACCTCCCAGCCTACCTTTATCCAG
AAAGCCAAATGAGAAAGAATTGCTAGAACTGGAATCAGCTTCCATTATTGAAGGCTCACTAGATGCGGGGAAAGAGACAA
AGGATGAAAAGCACTGGAAAGAGATGAAGTTGCATCTGGATGATTTGCCAGGAATTTTGGCACGGCTGTCCAAAATCAAA
CTCACAGCTCTGGTTGTCAGCACCACTTCAGCTGGATTTGCATTGGCCCCAGGACCTTTTGACTGGCCCTGTTTCCTGCT
TACTTCCCTGGGAACAGGCCTTGCATCCTGTGCTGCCAACTCCATCAATCAGTTTTTTGAGGTGCCATTTGATTCAAACA
TGAATAGAACAAAGAACAGACCTCTGGTTCGTGGACAGATCAGCCCGTTGCTAGCTGTGTCTTTTGCCACTTGCTGTGCT
GTTCCAGGAGTTGCCCTCCTGACCTGGGGGGTGAACCCCCTCACGGGAGCCCTGGGGGTCTTCAACATTTTCCTGTACAC
CTGTTGCTACACCCCGTTGAAGAGGATCAGCATTGCCAACACTTGGGTGGGTGCCGTTGTCGGGGCCGTCCCACCTGTCA
TGGGCTGGACAGCGGCCACCGGCAGCCTTGATGCTGGAGCATTTCTGCTGGGAGGGATCCTCTACTCGTGGCAGTTCCCG
CATTTCAACGCCCTGAGCTGGGGCCTCCGCGAAGACTACTCGCGAGGCGGCTACTGCATGATGTCGGTCACCCACCCGGC
GCTGTGCAGGCGCGTCGCCCTACGCCACTGCCTGGCCTTGATCGGACTGTCCACCGCGGCCCCCGTCCTGGATGTCACCA
CGTGGACCTTCCCTGTCATCTCCCTGCCCATCAACTTGTATATCACCTACCTCGGCTTTCGGTTTTACACCGACGCAGAC
CGCAAGAGCTCCCGGAAGCTGTTCTTCTGCAGCCTGTGGCACCTGCCCTTGCTCCTGCTGCTCATGCTCACCTGCAAGCG
GCCGCCAGGTGCCCGCGGGGCCGGGGCAGAGCCCCAGAGCTGA
ATGGCCGCGTCCCCGCACACTCTTTCCTCACGCCTCCTGACAGGATGTGCCTGGTATCTAGAGAGAAGAGCTGTGCAGGA
GGCCCCTCACACGTTCATGCATCTTTTCAGGAGCATCAACAGGCGGTGGATTACATTTCAGCACTTTACCTTCCTCAAGC
GCATGTATGTCACACAACTGAACAGAAGCCTCAACCAGCAAGTGAAACGGAAGCCAGAACCTGTGGCATTGCCTTTCCTT
GAGAAAACGTCTTTGGGTCAGGCCAAAGCAGAAATCTGTGAAATGAGACCTCTTCCACCTCCCAGCCTACCTTTATCCAG
AAAGCCAAATGAGAAAGAATTGCTAGAACTGGAATCAGCTTCCATTATTGAAGGCTCACTAGATGCGGGGAAAGAGACAA
AGGATGAAAAGCACTGGAAAGAGATGAAGTTGCATCTGGATGATTTGCCAGGAATTTTGGCACGGCTGTCCAAAATCAAA
CTCACAGCTCTGGTTGTCAGCACCACTTCAGCTGGATTTGCATTGGCCCCAGGACCTTTTGACTGGCCCTGTTTCCTGCT
TACTTCCCTGGGAACAGGCCTTGCATCCTGTGCTGCCAACTCCATCAATCAGTTTTTTGAGGTGCCATTTGATTCAAACA
TGAATAGAACAAAGAACAGACCTCTGGTTCGTGGACAGATCAGCCCGTTGCTAGCTGTGTCTTTTGCCACTTGCTGTGCT
GTTCCAGGAGTTGCCCTCCTGACCTGGGGGGTGAACCCCCTCACGGGAGCCCTGGGGGTCTTCAACATTTTCCTGTACAC
CTGTTGCTACACCCCGTTGAAGAGGATCAGCATTGCCAACACTTGGGTGGGTGCCGTTGTCGGGGCCGTCCCACCTGTCA
TGGGCTGGACAGCGGCCACCGGCAGCCTTGATGCTGGAGCATTTCTGCTGGGAGGGATCCTCTACTCGTGGCAGTTCCCG
CATTTCAACGCCCTGAGCTGGGGCCTCCGCGAAGACTACTCGCGAGGCGGCTACTGCATGATGTCGGTCACCCACCCGGC
GCTGTGCAGGCGCGTCGCCCTACGCCACTGCCTGGCCTTGATCGGACTGTCCACCGCGGCCCCCGTCCTGGATGTCACCA
CGTGGACCTTCCCTGTCATCTCCCTGCCCATCAACTTGTATATCACCTACCTCGGCTTTCGGTTTTACACCGACGCAGAC
CGCAAGAGCTCCCGGAAGCTGTTCTTCTGCAGCCTGTGGCACCTGCCCTTGCTCCTGCTGCTCATGCTCACCTGCAAGCG
GCCGCCAGGTGCCCGCGGGGCCGGGGCAGAGCCCCAGAGCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 16 .75 RPM |
| SRP017611_kidney | 19 .02 RPM |
| SRP017611_liver | 13 .63 RPM |
| SRP012049_cerebellum | 13 .36 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000015294 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000004522 | ortholog_one2one | 1 retrogene | |
| Felis catus | ENSFCAG00000010334 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000007457 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cfam_1380 | 67.38 | 62.27 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCAFG00000017899 retrocopies