Parental gene:

SCAMP1, ENSCAFG00000032395

Aliases:None
Description:secretory carrier membrane protein 1 [Source:HGNC Symbol;Acc:10563]
Organism:Dog (Canis familiaris)
Coordinates:3:28295770..28417516(-)


>ENSCAFG00000032395
ATGTCGGATTTCGACAGTAACCCGTTTGCGGACCCGGATCTCAACAACCCCTTCAAGGACCCATCAGTTACACAAGTGAC
AAGAAATGTTCCACCAGGACTTGATGAATATAATCCATTCTCGGATTCTAGAACACCTCCACCAGGCACTGTGAAAATGC
CTAACGTCCCCAGTACACAACCAGCAATAATGAAACCAACGGAGGAACATCCAGCTTATACACAGATTGCAAAGGAACAT
GCCTTGGCCCAAGCTGAGCTTCTTAAGCGCCAAGAAGAGCTAGAAAGAAAAGCAGCAGAATTAGATCGTCGAGAACGAGA
AATGCAAAATCTCAGTCAACATGGCAGAAAAAATAATTGGCCACCTCTTCCTGGCAATTTTCCTGTGGGACCTTGTTTTT
ACCAGGATTTTTCTGTAGACATTCCTGTAGAATTCCAGAAGACAGTAAAGATTATGTACTACTTGTGGATGTTCCACGCT
GTAACACTGTTTCTAAATATCTTCGGATGCTTGGCTTGGTTTTGTGTTGATCCTACAAGAGGGGTTGATTTTGGATTGAG
TATCCTGTGGTTCTTGCTTTTTACTCCTTGTTCATTTGTCTGTTGGTACAGACCACTTTACGGAGCTTTCAGGAGTGACA
GTTCATTCAGATTCTTTGTATTCTTCTTCGTCTATATTTGTCAGTTTGCTGTTCATGTACTCCAAGCTGCAGGATTTCAT
AATTGGGGCAACTGTGGTTGGATTTCATCCCTTACTGGTCTCAACCAAAGTATTCCCGTTGGAATCATGATGATAATCAT
AGCGGCACTTTTTACAGCATCAGCAGTCATCTCGCTAGTTATGTTTAAAAAGGTACACGGACTATACCGCACAACAGGTG
CTAGTTTTGAGAAAGCCCAACAAGAATTTGCAACAGGTGTGATGTCCAACAAAACTGTCCAGACTGCAGCTGCAAATGCA
GCTTCAAGTGCAGCAACTAGTGCAGCCCAGAATGCTTTCAAGGGTAACCAGATTTAG

Library Parental gene expression (RPM)
SRP012049_cerebellum 123 .77 RPM
SRP017611_brain 122 .18 RPM
SRP017611_kidney 92 .58 RPM
SRP017611_liver 8 .12 RPM



Species Parental gene accession Homology type Retrogenes number
Cavia porcellus ENSCPOG00000008868 ortholog_one2one 1 retrogene
retro_cpor_174,
Homo sapiens ENSG00000085365 ortholog_one2one 1 retrogene
retro_hsap_189,
Gorilla gorilla ENSGGOG00000015191 ortholog_one2one 1 retrogene
retro_ggor_269,
Macaca mulatta ENSMMUG00000016398 ortholog_one2one 1 retrogene
retro_mmul_396,
Monodelphis domestica ENSMODG00000019731 ortholog_one2one 1 retrogene
retro_mdom_964,
Nomascus leucogenys ENSNLEG00000012775 ortholog_one2one 1 retrogene
retro_nleu_1000,
Tarsius syrichta ENSTSYG00000014113 ortholog_one2one 1 retrogene
retro_tsyr_1676,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_227 55.60 77.51
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Download FASTA sequences of all ENSCAFG00000032395 retrocopies