Parental gene: | PPP1CB, ENSCHOG00000000859 |
| Aliases: | None |
| Description: | protein phosphatase 1, catalytic subunit, beta isozyme [Source:HGNC Symbol;Acc:9282] |
| Organism: | Sloth (Choloepus hoffmanni) |
| Coordinates: | GeneScaffold_7930:5712..39984(+) |
>ENSCHOG00000000859
GCGCTGCGGGCGGGGCGGTCGGTGGCGCTGGTGAGAGAAGGCCGAGCCGTCGCCGCAGCCTCCGCCGCCGAGAAGCCCTT
GTTCCCGCTGCCGGGAGGGAGAGCCTGTGCCGACAAAATGGCGGACGGGGAGCTGAACGTGGACAGTCTCATCACCCGAT
TGCTGGAGGTACGAGGATGTCGTCCAGGAAAGATTGTGCAGATGACTGAAGCAGAAGTTCGGGGCTTATGTATCAAGTCC
CGGGAGATCTTTCTCAGCCAGCCTATTCTTTTGGAATTGGAAGCACCATTGAAAATTTGTGGAGATATTCATGGACAGTA
TACAGATTTACTGCGATTATTTGAGTATGGAGGTTTCCCACCAGAAGCCAACTATCTTTTCTTAGGAGATTATGTGGACA
GAGGAAAGCAATCTTTGGAAACCATTTGTTTGCTATTGGCTTATAAAATCAAATATCCGGAGAACTTCTTTCTCTTAAGA
GGAAACCATGAGTGTGCTAGCATCAATCGCATTTATGGATTCTATGATGAATGCAAACGAAGGTTTAATATTAAATTGTG
GAAGACTTTCACTGATTGTTTTAACTGTCTGCCTATAGCTGCCATTGTGGATGAGAAGATCTTCTGCTGTCATGGAGGAC
TTTCACCAGACCTGCAATCAATGGAGCAGATTCGGAGAATTATGAGACCCACTGATGTCCCTGATACAGGTTTGCTCTGT
GATTTGCTATGGTCTGACCCAGATAAAGATGTGCAAGGCTGGGGAGAAAATGATCGTGGTGTTTCCTTCACTTTTGGAGC
TGATGTTGTCAGTAAATTTTTGAATCGTCACGATTTGGACTTGATTTGTCGTGCTCATCAGGTAGTTGAAGATGGGTATG
AATTTTTTGCTAAGCGACAATTGGTAACCCTATTTTCAGCCCCAAATTACTGTGGTGAATTTGATAATGCTGGTGGAATG
ATGAGTGTGGATGAAACTTTGATGTGCTCATTTCACATATTGAAGCCATCTGAAAAGAAAGCTAAGTACCAGTATGGTGG
ACTGAATTCTGGGCGTCCTGTTACTCCACCTCGGACAGCTAATCCACCGAAGAAAAGGTGA
GCGCTGCGGGCGGGGCGGTCGGTGGCGCTGGTGAGAGAAGGCCGAGCCGTCGCCGCAGCCTCCGCCGCCGAGAAGCCCTT
GTTCCCGCTGCCGGGAGGGAGAGCCTGTGCCGACAAAATGGCGGACGGGGAGCTGAACGTGGACAGTCTCATCACCCGAT
TGCTGGAGGTACGAGGATGTCGTCCAGGAAAGATTGTGCAGATGACTGAAGCAGAAGTTCGGGGCTTATGTATCAAGTCC
CGGGAGATCTTTCTCAGCCAGCCTATTCTTTTGGAATTGGAAGCACCATTGAAAATTTGTGGAGATATTCATGGACAGTA
TACAGATTTACTGCGATTATTTGAGTATGGAGGTTTCCCACCAGAAGCCAACTATCTTTTCTTAGGAGATTATGTGGACA
GAGGAAAGCAATCTTTGGAAACCATTTGTTTGCTATTGGCTTATAAAATCAAATATCCGGAGAACTTCTTTCTCTTAAGA
GGAAACCATGAGTGTGCTAGCATCAATCGCATTTATGGATTCTATGATGAATGCAAACGAAGGTTTAATATTAAATTGTG
GAAGACTTTCACTGATTGTTTTAACTGTCTGCCTATAGCTGCCATTGTGGATGAGAAGATCTTCTGCTGTCATGGAGGAC
TTTCACCAGACCTGCAATCAATGGAGCAGATTCGGAGAATTATGAGACCCACTGATGTCCCTGATACAGGTTTGCTCTGT
GATTTGCTATGGTCTGACCCAGATAAAGATGTGCAAGGCTGGGGAGAAAATGATCGTGGTGTTTCCTTCACTTTTGGAGC
TGATGTTGTCAGTAAATTTTTGAATCGTCACGATTTGGACTTGATTTGTCGTGCTCATCAGGTAGTTGAAGATGGGTATG
AATTTTTTGCTAAGCGACAATTGGTAACCCTATTTTCAGCCCCAAATTACTGTGGTGAATTTGATAATGCTGGTGGAATG
ATGAGTGTGGATGAAACTTTGATGTGCTCATTTCACATATTGAAGCCATCTGAAAAGAAAGCTAAGTACCAGTATGGTGG
ACTGAATTCTGGGCGTCCTGTTACTCCACCTCGGACAGCTAATCCACCGAAGAAAAGGTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Echinops telfairi | ENSETEG00000015038 | ortholog_one2one | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000003785 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000004612 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_chof_539 | 75.64 | 63.66 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_chof_2023 | 72.28 | 53.83 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_chof_2063 | 91.30 | 81.15 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_chof_2076 | 74.25 | 80.87 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_chof_2154 | 84.49 | 82.24 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCHOG00000000859 retrocopies