Parental gene: | Ppp1cb, ENSRNOG00000004612 |
| Aliases: | None |
| Description: | Serine/threonine-protein phosphatase PP1-beta catalytic subunit [Source:UniProtKB/Swiss-Prot;Acc:P62142] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 6:33416540..33448276(-) |
>ENSRNOG00000004612
ATGGCGGACGGGGAGCTGAACGTGGACAGCCTCATCACCCGCCTGCTGGAGGTACGAGGATGTCGTCCGGGAAAAATTGT
GCAGATGACTGAAGCAGAAGTCCGAGGACTGTGTATCAAGTCTCGTGAAATCTTTCTTAGCCAGCCTATTCTTTTGGAAT
TGGAAGCGCCACTGAAGATTTGTGGAGATATTCATGGACAGTATACAGACTTACTGAGATTATTTGAATATGGAGGTTTT
CCACCAGAAGCCAACTATCTTTTCTTAGGAGATTATGTGGACAGAGGAAAGCAGTCTTTGGAAACCATCTGTTTGCTATT
GGCTTACAAAATCAAATACCCAGAGAACTTCTTTCTTCTACGAGGAAACCATGAGTGTGCTAGCATCAACCGCATTTATG
GATTCTATGATGAGTGCAAACGAAGATTTAATATTAAATTGTGGAAGACATTCACTGATTGTTTTAATTGTCTGCCTATA
GCTGCTATTGTTGATGAGAAAATCTTCTGCTGTCATGGAGGACTGTCACCAGACCTACAGTCTATGGAACAGATTCGGAG
AATTATGAGACCCACTGACGTACCTGATACAGGTTTGCTTTGTGATTTACTGTGGTCCGACCCAGATAAGGATGTACAAG
GCTGGGGAGAAAATGATCGTGGTGTTTCTTTTACTTTTGGAGCTGATGTAGTCAGTAAATTTCTGAATCGTCATGATTTG
GACTTGATTTGTCGAGCCCATCAGGTGGTAGAAGATGGATATGAATTTTTTGCTAAACGACAATTGGTAACTTTATTTTC
TGCCCCAAATTACTGCGGCGAGTTTGACAATGCTGGTGGTATGATGAGTGTGGATGAAACTTTGATGTGTTCATTCCAGA
TATTGAAACCATCTGAAAAGAAAGCTAAGTACCAGTATGGTGGGCTGAATTCTGGACGTCCTGTCACTCCGCCTCGAACA
GCTAATCCACCGAAGAAAAGGTGA
ATGGCGGACGGGGAGCTGAACGTGGACAGCCTCATCACCCGCCTGCTGGAGGTACGAGGATGTCGTCCGGGAAAAATTGT
GCAGATGACTGAAGCAGAAGTCCGAGGACTGTGTATCAAGTCTCGTGAAATCTTTCTTAGCCAGCCTATTCTTTTGGAAT
TGGAAGCGCCACTGAAGATTTGTGGAGATATTCATGGACAGTATACAGACTTACTGAGATTATTTGAATATGGAGGTTTT
CCACCAGAAGCCAACTATCTTTTCTTAGGAGATTATGTGGACAGAGGAAAGCAGTCTTTGGAAACCATCTGTTTGCTATT
GGCTTACAAAATCAAATACCCAGAGAACTTCTTTCTTCTACGAGGAAACCATGAGTGTGCTAGCATCAACCGCATTTATG
GATTCTATGATGAGTGCAAACGAAGATTTAATATTAAATTGTGGAAGACATTCACTGATTGTTTTAATTGTCTGCCTATA
GCTGCTATTGTTGATGAGAAAATCTTCTGCTGTCATGGAGGACTGTCACCAGACCTACAGTCTATGGAACAGATTCGGAG
AATTATGAGACCCACTGACGTACCTGATACAGGTTTGCTTTGTGATTTACTGTGGTCCGACCCAGATAAGGATGTACAAG
GCTGGGGAGAAAATGATCGTGGTGTTTCTTTTACTTTTGGAGCTGATGTAGTCAGTAAATTTCTGAATCGTCATGATTTG
GACTTGATTTGTCGAGCCCATCAGGTGGTAGAAGATGGATATGAATTTTTTGCTAAACGACAATTGGTAACTTTATTTTC
TGCCCCAAATTACTGCGGCGAGTTTGACAATGCTGGTGGTATGATGAGTGTGGATGAAACTTTGATGTGTTCATTCCAGA
TATTGAAACCATCTGAAAAGAAAGCTAAGTACCAGTATGGTGGGCTGAATTCTGGACGTCCTGTCACTCCGCCTCGAACA
GCTAATCCACCGAAGAAAAGGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 85 .26 RPM |
| SRP017611_kidney | 212 .56 RPM |
| SRP017611_brain | 262 .35 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000000859 | ortholog_one2one | 5 retrogenes | |
| Echinops telfairi | ENSETEG00000015038 | ortholog_one2one | 2 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000029081 | possible_ortholog | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_1455 | 87.01 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_rnor_2344 | 88.41 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000004612 retrocopies