Parental gene: | PPP1CB, ENSETEG00000015038 |
| Aliases: | None |
| Description: | protein phosphatase 1, catalytic subunit, beta isozyme [Source:HGNC Symbol;Acc:9282] |
| Organism: | Lesser hedgehog tenrec (Echinops telfairi) |
| Coordinates: | GeneScaffold_5952:38013..66149(+) |
>ENSETEG00000015038
ATGGCGGACGGGGAGCTGAACGTGGACAGTCTCATCACCCGATTGCTGGAGGTACGAGGATGTCGTCCAGGGAAAATTGT
GCAGATGACTGAAGCAGAAGTTCGGGGCTTATGTATCAAGTCTCGGGAGATCTTTCTCAGCCAGCCTATTCTTTTGGAAT
TGGAAGCACCACTGAAAATTTGTGGAGATATTCATGGACAGTATACAGATTTACTGCGATTATTTGAGTATGGAGGTTTC
CCACCAGAAGCCAACTATCTTTTCTTAGGCGACTATGTGGACAGAGGAAAGCAGTCTTTGGAAACCATTTGTTTGCTACT
GGCTTATAAAATCAAATACCCAGAGAACTTCTTTCTCTTAAGAGGAAATCATGAGTGTGCTAGCATCAATCGCATTTATG
GATTCTGTGATGAATGCAAACGAAGGTTTAATATTAAATTATGGAAAACCTTCACTGATTGTTTTAACTGTCTGCCGATA
GCTGCCATTGTGGATGAGAAGATCTTCTGTTGCCACGGAGGACTGTCACCAGATCTACAATCTATGGAGCAGATTCGAAG
AATCATGAGGCCTACTGATGTTCCTGATACAGGTTTGCTCTGCGATTTGCTGTGGTCTGACCCAGATAAGGACGTGCAAG
GCTGGGGGGAAAATGATCGTGGGGTTTCCTTCACTTTCGGAGCTGATGTTGTCAGTAAATTTCTGAATCGTCACGATTTA
GACTTGATTTGTCGAGCTCATCAGGTGGTTGAAGATGGATATGAATTTTTTGCTAAACGACAACTGGTAACACTGTTTTC
AGCCCCAAATTACTGTGGCGAATTTGATAATGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNA
TACTGAAACCATCTGAGAAGAAAGCTAAGTACCAGTATGGTGGACTGAATTCTGGACGTCCTGTCACTCCACCTCGAACA
GCGAATCCACCGAAGAAAAGGTGA
ATGGCGGACGGGGAGCTGAACGTGGACAGTCTCATCACCCGATTGCTGGAGGTACGAGGATGTCGTCCAGGGAAAATTGT
GCAGATGACTGAAGCAGAAGTTCGGGGCTTATGTATCAAGTCTCGGGAGATCTTTCTCAGCCAGCCTATTCTTTTGGAAT
TGGAAGCACCACTGAAAATTTGTGGAGATATTCATGGACAGTATACAGATTTACTGCGATTATTTGAGTATGGAGGTTTC
CCACCAGAAGCCAACTATCTTTTCTTAGGCGACTATGTGGACAGAGGAAAGCAGTCTTTGGAAACCATTTGTTTGCTACT
GGCTTATAAAATCAAATACCCAGAGAACTTCTTTCTCTTAAGAGGAAATCATGAGTGTGCTAGCATCAATCGCATTTATG
GATTCTGTGATGAATGCAAACGAAGGTTTAATATTAAATTATGGAAAACCTTCACTGATTGTTTTAACTGTCTGCCGATA
GCTGCCATTGTGGATGAGAAGATCTTCTGTTGCCACGGAGGACTGTCACCAGATCTACAATCTATGGAGCAGATTCGAAG
AATCATGAGGCCTACTGATGTTCCTGATACAGGTTTGCTCTGCGATTTGCTGTGGTCTGACCCAGATAAGGACGTGCAAG
GCTGGGGGGAAAATGATCGTGGGGTTTCCTTCACTTTCGGAGCTGATGTTGTCAGTAAATTTCTGAATCGTCACGATTTA
GACTTGATTTGTCGAGCTCATCAGGTGGTTGAAGATGGATATGAATTTTTTGCTAAACGACAACTGGTAACACTGTTTTC
AGCCCCAAATTACTGTGGCGAATTTGATAATGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNA
TACTGAAACCATCTGAGAAGAAAGCTAAGTACCAGTATGGTGGACTGAATTCTGGACGTCCTGTCACTCCACCTCGAACA
GCGAATCCACCGAAGAAAAGGTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000000859 | ortholog_one2one | 5 retrogenes | |
| Echinops telfairi | ENSETEG00000015721 | within_species_paralog | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000004612 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_etel_1223 | 82.59 | 68.50 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_etel_1364 | 59.39 | 59.33 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSETEG00000015038 retrocopies