Parental gene: | CASC4, ENSCHOG00000006998 |
| Aliases: | None |
| Description: | cancer susceptibility candidate 4 [Source:HGNC Symbol;Acc:24892] |
| Organism: | Sloth (Choloepus hoffmanni) |
| Coordinates: | GeneScaffold_5936:7492..33736(+) |
>ENSCHOG00000006998
GTTAAACTACAGAACAACATATCATATCAAATGGCAGACATACATCATTTAAAGGAACAACTTGCTGAGCTTCGTCAGGA
GTTTCTTCGACAAGAAGACCAGCTTCAGGACTATAGGAAGAACAATACTTACNNNNNNNNNNNNNNNNNNNNNNNNNNTT
TTCAGTGTGGACAACAGATAAAGGAATTAAGAACACAGCATGAAGAAAATATTAAAAAGTTAGCAGACCAATTTGTGCAG
GAACAAAAGCAAGAGATGCACAAGGTTCAATCAAATGATGACAAGGATTTGGGTATAAATGATCATGCAGTACCTAAAAA
TATTCCAAAAGTAGCTGAGAATGCTGCAGATAAGAATGAAGAGCCTTCAAGCAATCATATTCTACATGGGAAAGAACACA
TCAAACGAGGTGGTGATGCAGGAATGCCTGGGATAGAAGAGAATGACCTTGCAAAAGCTGAAGATCTTCCCACTTCTTTA
AAGAAGCCCCCTCTTTCAGTTTCTAAACATGGAAGTCATCAAGCAATCTCTCGTCTTGCAACTGGACAACCTCTCTCCCC
AAACATGGCTCCAGATTCACAAATGAACCACAATCGAAATCCTGGTACTTCAAAACAGATATCTTCTAATTCTCTTCAGC
GTTTAATTCCAGGCCCAAACTTGGAAAGTGAACCTAGAGTTCAGACAGATATGCTAAAGCAGGATACCAAGGATAGAGTT
GGTGATTTCCATAAATTGAAGCAAAGCCGATTCTTTGATGAGAATGAATCCCCTGTTGATCCGCAACATGGATCTAAACT
GGCGGATTATAATGGGGATGATGGTAACGTAGGTGAGTATGAGGCAGACAAGCAGGCTGAGCTGGCTTACAATGAGGAAG
AAGATGGTGATGGTGGAGAGGAAGACGTCCAA
GTTAAACTACAGAACAACATATCATATCAAATGGCAGACATACATCATTTAAAGGAACAACTTGCTGAGCTTCGTCAGGA
GTTTCTTCGACAAGAAGACCAGCTTCAGGACTATAGGAAGAACAATACTTACNNNNNNNNNNNNNNNNNNNNNNNNNNTT
TTCAGTGTGGACAACAGATAAAGGAATTAAGAACACAGCATGAAGAAAATATTAAAAAGTTAGCAGACCAATTTGTGCAG
GAACAAAAGCAAGAGATGCACAAGGTTCAATCAAATGATGACAAGGATTTGGGTATAAATGATCATGCAGTACCTAAAAA
TATTCCAAAAGTAGCTGAGAATGCTGCAGATAAGAATGAAGAGCCTTCAAGCAATCATATTCTACATGGGAAAGAACACA
TCAAACGAGGTGGTGATGCAGGAATGCCTGGGATAGAAGAGAATGACCTTGCAAAAGCTGAAGATCTTCCCACTTCTTTA
AAGAAGCCCCCTCTTTCAGTTTCTAAACATGGAAGTCATCAAGCAATCTCTCGTCTTGCAACTGGACAACCTCTCTCCCC
AAACATGGCTCCAGATTCACAAATGAACCACAATCGAAATCCTGGTACTTCAAAACAGATATCTTCTAATTCTCTTCAGC
GTTTAATTCCAGGCCCAAACTTGGAAAGTGAACCTAGAGTTCAGACAGATATGCTAAAGCAGGATACCAAGGATAGAGTT
GGTGATTTCCATAAATTGAAGCAAAGCCGATTCTTTGATGAGAATGAATCCCCTGTTGATCCGCAACATGGATCTAAACT
GGCGGATTATAATGGGGATGATGGTAACGTAGGTGAGTATGAGGCAGACAAGCAGGCTGAGCTGGCTTACAATGAGGAAG
AAGATGGTGATGGTGGAGAGGAAGACGTCCAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000166734 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000005533 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000005362 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000006428 | ortholog_one2many | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000007010 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_chof_627 | 80.40 | 82.24 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_chof_1422 | 78.09 | 82.24 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_chof_1445 | 75.63 | 64.14 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_chof_2453 | 77.29 | 82.24 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCHOG00000006998 retrocopies