Parental gene: | KRR1, ENSCHOG00000009636 |
| Aliases: | None |
| Description: | KRR1, small subunit (SSU) processome component, homolog (yeast) [Source:HGNC Symbol;Acc:5176] |
| Organism: | Sloth (Choloepus hoffmanni) |
| Coordinates: | scaffold_59827:166..8595(-) |
>ENSCHOG00000009636
GAAGCAGAGCTCCTCACTGTTCCTGATGGTTGGAAGGAACCAGCCTTTTCCAAAGAGGATAATCCCAGAGGACTTCTAGA
GGAAAGCAGTTTTGCAACTTTGTTTCCAAAATATAGGGAGGCTTACTTGAAAGAATGCTGGCCATTGGTACAGAAAGCCT
TGAATGAACATCACATTAATGCAACCCTGGACCTGATCGAGGGCAGCATGACGGTTTATACAACAAAGAAGACTTTTGAT
CCATACATCATCATTAGGGCCAGAGACCTAATAAAACTTTTAGCAAGAAGTGTTTCATTTGAACAGGCAGTTCGAATTCT
TCAGGATGATATTGCATGTGACATCATTAAAATAGGTTCTTTAGTACGAAATAAAGAAAGGTTTGTAAAAAGAAGACAAC
GGCTTATTGGTCCAAAAGGATCTACACTGAAGGCATTGGAACTCTTAACAAACTGTTACATTATGGTTCAGGGAAACACG
GTTTCTGCCATTGGACCTTTTAGTGGCTTAAAAGAGGTTCGAAAAGTAGTCTTAGATACTATGAAGAATATTCATCCAAT
TTATAACATTAAAACCTTAATGATTAAGCGAGAGTTGGCAAAAGATTCTGAGTTAAGATCACAAAGTTGGGAAAGATTTT
TGCCACAGTTCAAACACAAAAATGTGAATAAACGCAAGGAACCAAAGAAAAAAACTGTTAAAAAAGAATATACGCCATTC
CCACCACCACAACCAGAAAGTCAGATTGATAAAGAATTGGCTAGTGGTGAATACTTTTTGAAGGCAAGTCAGAAAAAGCG
ACAGAAAATGGAAACAATAAAGGCTAAGCAAGCAGAAGCTCTCAGTAAGAGACAAGAGGAAAGAAACAAGGCTTTTATTC
CACCAAAAGAAAAACCAGTTGTGAAACCTAAGAAAGGTTCTACGGAAATTAAAATTGATGTGGCTGCCATCAAGGAAAAG
GTTAAGAAAGCAAAGAATAAGAAACTGGGAGCACTTACAACTGAAGAAATTACACTTAAGATGGAAGCAGATGAAAAGAA
AAAGAAAAAAAAGAAGTAA
GAAGCAGAGCTCCTCACTGTTCCTGATGGTTGGAAGGAACCAGCCTTTTCCAAAGAGGATAATCCCAGAGGACTTCTAGA
GGAAAGCAGTTTTGCAACTTTGTTTCCAAAATATAGGGAGGCTTACTTGAAAGAATGCTGGCCATTGGTACAGAAAGCCT
TGAATGAACATCACATTAATGCAACCCTGGACCTGATCGAGGGCAGCATGACGGTTTATACAACAAAGAAGACTTTTGAT
CCATACATCATCATTAGGGCCAGAGACCTAATAAAACTTTTAGCAAGAAGTGTTTCATTTGAACAGGCAGTTCGAATTCT
TCAGGATGATATTGCATGTGACATCATTAAAATAGGTTCTTTAGTACGAAATAAAGAAAGGTTTGTAAAAAGAAGACAAC
GGCTTATTGGTCCAAAAGGATCTACACTGAAGGCATTGGAACTCTTAACAAACTGTTACATTATGGTTCAGGGAAACACG
GTTTCTGCCATTGGACCTTTTAGTGGCTTAAAAGAGGTTCGAAAAGTAGTCTTAGATACTATGAAGAATATTCATCCAAT
TTATAACATTAAAACCTTAATGATTAAGCGAGAGTTGGCAAAAGATTCTGAGTTAAGATCACAAAGTTGGGAAAGATTTT
TGCCACAGTTCAAACACAAAAATGTGAATAAACGCAAGGAACCAAAGAAAAAAACTGTTAAAAAAGAATATACGCCATTC
CCACCACCACAACCAGAAAGTCAGATTGATAAAGAATTGGCTAGTGGTGAATACTTTTTGAAGGCAAGTCAGAAAAAGCG
ACAGAAAATGGAAACAATAAAGGCTAAGCAAGCAGAAGCTCTCAGTAAGAGACAAGAGGAAAGAAACAAGGCTTTTATTC
CACCAAAAGAAAAACCAGTTGTGAAACCTAAGAAAGGTTCTACGGAAATTAAAATTGATGTGGCTGCCATCAAGGAAAAG
GTTAAGAAAGCAAAGAATAAGAAACTGGGAGCACTTACAACTGAAGAAATTACACTTAAGATGGAAGCAGATGAAAAGAA
AAAGAAAAAAAAGAAGTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000006437 | ortholog_one2one | 1 retrogene | |
| Canis familiaris | ENSCAFG00000005665 | ortholog_one2many | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000020451 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000008145 | ortholog_one2one | 5 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_chof_365 | 72.49 | 52.56 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_chof_1030 | 73.89 | 50.85 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_chof_1826 | 82.90 | 53.98 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_chof_2438 | 94.13 | 96.88 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_chof_2452 | 73.82 | 53.12 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCHOG00000009636 retrocopies