Parental gene: | COPS2, ENSCHOG00000013375 |
| Aliases: | None |
| Description: | COP9 signalosome subunit 2 [Source:HGNC Symbol;Acc:30747] |
| Organism: | Sloth (Choloepus hoffmanni) |
| Coordinates: | GeneScaffold_5865:7647..30859(-) |
>ENSCHOG00000013375
ATGTCTGACATGGAGGATGATTTCATGTGCCATGAGGAGGAGAACTACAACCTGGAATATTCTGAAGATAGTAACTCCGA
ACCAAATGTGGATTTGGAAAATCAGTACTATAATTCCAAAGCGTTGAAAGAAGATGACCCAAAAGCAGCATTAAGCAGTT
TCCAAAAGGTTTTGGAACTTGAAGGTGAAAAAGGAGAATGGGGATTTAAAGCACTGAAACAAATGATTAAGATTAACTTT
AAGTTGACAAACTTCCCAGAAATGATGAACAGATATAAACAGCTGTTGACATATATTCGGAGTGCAGTCACAAGAAATTA
TTTTGAAAAATCCATTAATTGTATTCTTGATTATATCTCCACTAATTCTGATTTTTTATGTCAGATGGATTTACTGCAGG
AATTCTATGAAACAACACTGGAAGCTTTGAAAGATGCTAAGAATGATAGACTCTGGTTTAAGACAAACACAAAGCTTGGA
AAATTATATTTAGAACGTGAGTATGGAAAGCTTCAAAAAATTTTNNNNNNNNNNNNNNNNNNNNNNNNNACTGATGATGG
AGAAGATGACCTGAAAAAAGGTACACAGTTATTAGAAATATATGCTTTGGAAATTCAGATGTACACAGCACAGAAGAATA
ACAAAAAGCTAAAAGCACTCTATGAACAATCACTTCACATCAAGTCTGCCATCCCTCATCCACTGATCATGGGAGTCATC
AGAGAATGTGGTGGTAAAATGCACTTGAGAGAGGGTGAATTTGAAAAGGCACACACTGATTTTTTTGAAGCCTTCAAGAA
TTATGATGAATCGGGGAGTCCTAGACGAACTACTTGCTTAAAATATTTGGTCTTAGCAAATATGCTAATGAAATCGGGAA
TAAATCCATTTGACTCACAGGAGGCCAAGCCGTACAAAAATGATCCAGAAATTCTAGCAATGACGAATTTAGTAAGTGCC
TATCAGAATAATGACATCACTGAATTTGAAAAGATTCTGAAAACAAATCACAGCAACATCATGGATGATCCTTTCATAAG
GGAACATATTGAAGAGCTTTTACGAAACATCAGAACACAAGTGCTCATAAAATTAATTAAGCCTTACACAAGAATACATA
TTCCTTTTATTTCTAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACT
ATTCATGGCCGAATTGATCAAGTCAACCAACTCCTTGAACTGGATCATCAGAAGAGGGGTGGTGCACGATATACTGCTCT
AGATAAATGGACCAACCAATTAAATTCTCTCAACCAGGCTGTAGTCAGTAAACTGGCTTAA
ATGTCTGACATGGAGGATGATTTCATGTGCCATGAGGAGGAGAACTACAACCTGGAATATTCTGAAGATAGTAACTCCGA
ACCAAATGTGGATTTGGAAAATCAGTACTATAATTCCAAAGCGTTGAAAGAAGATGACCCAAAAGCAGCATTAAGCAGTT
TCCAAAAGGTTTTGGAACTTGAAGGTGAAAAAGGAGAATGGGGATTTAAAGCACTGAAACAAATGATTAAGATTAACTTT
AAGTTGACAAACTTCCCAGAAATGATGAACAGATATAAACAGCTGTTGACATATATTCGGAGTGCAGTCACAAGAAATTA
TTTTGAAAAATCCATTAATTGTATTCTTGATTATATCTCCACTAATTCTGATTTTTTATGTCAGATGGATTTACTGCAGG
AATTCTATGAAACAACACTGGAAGCTTTGAAAGATGCTAAGAATGATAGACTCTGGTTTAAGACAAACACAAAGCTTGGA
AAATTATATTTAGAACGTGAGTATGGAAAGCTTCAAAAAATTTTNNNNNNNNNNNNNNNNNNNNNNNNNACTGATGATGG
AGAAGATGACCTGAAAAAAGGTACACAGTTATTAGAAATATATGCTTTGGAAATTCAGATGTACACAGCACAGAAGAATA
ACAAAAAGCTAAAAGCACTCTATGAACAATCACTTCACATCAAGTCTGCCATCCCTCATCCACTGATCATGGGAGTCATC
AGAGAATGTGGTGGTAAAATGCACTTGAGAGAGGGTGAATTTGAAAAGGCACACACTGATTTTTTTGAAGCCTTCAAGAA
TTATGATGAATCGGGGAGTCCTAGACGAACTACTTGCTTAAAATATTTGGTCTTAGCAAATATGCTAATGAAATCGGGAA
TAAATCCATTTGACTCACAGGAGGCCAAGCCGTACAAAAATGATCCAGAAATTCTAGCAATGACGAATTTAGTAAGTGCC
TATCAGAATAATGACATCACTGAATTTGAAAAGATTCTGAAAACAAATCACAGCAACATCATGGATGATCCTTTCATAAG
GGAACATATTGAAGAGCTTTTACGAAACATCAGAACACAAGTGCTCATAAAATTAATTAAGCCTTACACAAGAATACATA
TTCCTTTTATTTCTAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACT
ATTCATGGCCGAATTGATCAAGTCAACCAACTCCTTGAACTGGATCATCAGAAGAGGGGTGGTGCACGATATACTGCTCT
AGATAAATGGACCAACCAATTAAATTCTCTCAACCAGGCTGTAGTCAGTAAACTGGCTTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000013425 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000001585 | ortholog_one2one | 2 retrogenes | |
| Echinops telfairi | ENSETEG00000019523 | ortholog_one2one | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000009838 | ortholog_one2many | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000002466 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000006455 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000013284 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000008306 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000000462 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_chof_678 | 74.28 | 61.43 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_chof_1083 | 76.42 | 78.25 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_chof_1288 | 74.50 | 78.25 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_chof_2209 | 90.44 | 95.96 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_chof_2371 | 76.99 | 78.25 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_chof_2520 | 78.63 | 78.25 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_chof_2550 | 78.12 | 78.25 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCHOG00000013375 retrocopies