Parental gene:

COPS2, ENSMODG00000002466

Aliases:None
Description:COP9 signalosome subunit 2 [Source:HGNC Symbol;Acc:30747]
Organism:Opossum (Monodelphis domestica)
Coordinates:1:179524201..179580672(-)


>ENSMODG00000002466
ATGTCTGACATGGAGGATGATTTCATGTGCGATGATGAGGAGGACTACGACCTGGAATACTCTGAAGATAGTAACTCTGA
ACCAAATGTGGATTTGGAAAACCAATACTACAATTCCAAAGCATTGAAGGAAGATGACCCAAAAGCAGCATTAAGCAGTT
TTCAGAAGGTTTTGGAGCTTGAAGGTGAAAAAGGAGAATGGGGATTTAAAGCACTGAAACAGATGATTAAAATAAACTTC
AAGTTGACGAACTATCCAGAAATGATGAATAGATATAAACAACTATTGACCTACATTCGGAGTGCAGTCACAAGGAATTA
TTCTGAAAAGTCTATTAATTCTATTCTTGATTATATCTCTACTTCTAAACAGAATTCTGATTTTTTATGTCAGATGGATT
TACTGCAGGAATTCTATGAAACAACACTGGAAGCTCTGAAAGATGCTAAGAATGATAGGCTGTGGTTTAAGACAAACACA
AAGCTTGGAAAATTATATCTAGAACGAGAAGAATATGGAAAGCTTCAAAAAATTTTGCGCCAGTTGCATCAGTCATGCCA
GACGGATGATGGAGAAGATGACTTAAAAAAGGGTACACAATTATTGGAAATTTATGCATTAGAAATTCAAATGTATACTG
CACAGAAAAATAACAAAAAACTTAAAGCATTGTATGAACAGTCACTGCACATCAAGTCAGCCATTCCCCATCCACTGATC
ATGGGTGTCATTAGAGAATGTGGTGGTAAAATGCACTTAAGAGAAGGTGAATTTGAAAAGGCTCACACTGATTTTTTTGA
AGCATTCAAGAATTATGATGAATCAGGGAGTCCCAGACGAACCACTTGCTTAAAATATTTGGTCTTAGCAAATATGCTAA
TGAAATCGGGAATAAATCCATTTGACTCTCAGGAGGCAAAGCCGTATAAAAATGATCCAGAGATTCTAGCGATGACGAAT
TTAGTAAGTGCCTATCAGAATAACGACATCACTGAATTTGAGAAGATTCTGAAAACAAATCACAGCAACATCATGGACGA
TCCCTTCATAAGGGAGCACATTGAAGAGCTTTTGCGAAACATCAGAACACAAGTGCTTATAAAATTAATTAAGCCTTACA
CAAGAATACATATTCCTTTTATTTCAAAGGAATTAAACATAGATGTAGCTGATGTGGAGAGCTTGCTGGTACAATGCATA
TTGGATAACACTATTCATGGCCGAATTGATCAAGTCAACCAGCTCCTTGAACTGGATCATCAGAAGAGGGGTGGTGCCCG
ATATACTGCACTAGATAAATGGACCAACCAGCTAAATTCTCTCAACCAGGCTGTAGTCAGTAAACTGGCTTAA

Library Parental gene expression (RPM)
SRP007412_brain 238 .27 RPM
SRP007412_cerebellum 215 .79 RPM
SRP007412_heart 270 .72 RPM
SRP007412_kidney 422 .70 RPM
SRP007412_liver 242 .18 RPM
SRP007412_testis 421 .74 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000013425 ortholog_one2one 1 retrogene
retro_btau_452,
Choloepus hoffmanni ENSCHOG00000013375 ortholog_one2one 7 retrogenes
retro_chof_1083, retro_chof_1288, retro_chof_2209, retro_chof_2371, retro_chof_2520, retro_chof_2550, retro_chof_678,
Callithrix jacchus ENSCJAG00000001585 ortholog_one2one 2 retrogenes
retro_cjac_3105, retro_cjac_3117,
Echinops telfairi ENSETEG00000019523 ortholog_one2one 2 retrogenes
retro_etel_2160, retro_etel_88,
Macaca mulatta ENSMMUG00000009838 ortholog_one2many 1 retrogene
retro_mmul_62,
Oryctolagus cuniculus ENSOCUG00000006455 ortholog_one2one 1 retrogene
retro_ocun_1296,
Otolemur garnettii ENSOGAG00000013284 ortholog_one2one 1 retrogene
retro_ogar_1513,
Tupaia belangeri ENSTBEG00000008306 ortholog_one2one 1 retrogene
retro_tbel_4497,
Tursiops truncatus ENSTTRG00000000462 ortholog_one2one 1 retrogene
retro_ttru_328,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mdom_891 73.58 68.89
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Download FASTA sequences of all ENSMODG00000002466 retrocopies