Parental gene:

PPP1CA, ENSCJAG00000000983

Aliases:None
Description:protein phosphatase 1, catalytic subunit, alpha isozyme [Source:HGNC Symbol;Acc:9281]
Organism:Marmoset (Callithrix jacchus)
Coordinates:11:123181762..123207426(-)


>ENSCJAG00000000983
ATGAGGCAGCGCGCCGACCGCCGGAGCATGGTCTCCACCAGCGGCGCGGCGGCCGCGTCGTCAGCCGCCGGCCCCAGCCG
CGGCGCGGCCCACAGCCCCTCGAGCGCGCCGCACGCCTCCAGGCACAGGCCGCTGTTCAGCTCCAGGGCTACTGGGCTTC
TCCAGCAGTGCCAGCACCGTGTCCACCACTGTACCCAGCTCTGCCCTAGAGTACAGACGAAATGCCTGCCGCCCCCGCCA
GCGCCAGCCACTGAGCTTCACAGCCACCTGCAGCAAGGAGGGGAAGGCCTCCTGGACACCACCCCAGGTACTTCAGGGCG
GGATGCTCCTACCACAGGAGCCATGCAGGGCTCGCGGCCTGGCAAGAATGTACAGCTGACAGAGAACGAGATCCGCGGTC
TGTGCCTGAAATCCCGGGAGATTTTCCTGAGCCAGCCCATTCTCCTGGAGCTGGAGGCACCCCTCAAGATCTGCGGTGAC
ATCCACGGCCAGTACTACGACCTTCTGCGACTATTTGAGTATGGGGGCTTCCCTCCGGAGAGCAACTATCTCTTTCTGGG
GGACTATGTGGACAGGGGCAAGCAGTCCTTGGAGACCATCTGCCTGCTGCTGGCCTACAAGATCAAGTACCCCGAGAACT
TCTTCCTGCTCCGTGGGAACCACGAGTGTGCCAGCATCAACCGCATCTATGGTTTCTACGATGAGTGCAAGAGACGCTAC
AACATCAAACTGTGGAAAACCTTCACGGACTGCTTTAACTGCCTGCCCATCGCAGCCATCGTGGATGAAAAGATCTTCTG
CTGCCACGGAGGCTTGTCCCCAGACCTGCAATCCATGGAGCAGATCCGGCGTATCATGCGGCCCACAGACGTGCCTGACC
AGGGCCTGCTGTGTGACCTACTGTGGTCTGACCCTGACAAGGACGTGCAAGGCTGGGGCGAGAACGACCGTGGCGTGTCT
TTTACCTTCGGAGCCGAGGTGGTGGCCAAGTTCCTGCACAAGCACGACTTGGACCTCATCTGCCGGGCGCACCAGGTGGT
AGAAGATGGCTATGAGTTCTTTGCCAAGAGGCAGCTGGTGACACTTTTCTCAGCTCCCAACTACTGTGGCGAGTTTGACA
ATGCTGGTGCCATGATGAGCGTGGATGAGACCCTCATGTGCTCCTTCCAG

Library Parental gene expression (RPM)
SRP051959_spleen 21 .64 RPM
SRP051959_skeletal_muscle 23 .24 RPM
SRP051959_lymph_node 27 .88 RPM
SRP051959_lung 20 .16 RPM
SRP051959_liver 26 .38 RPM
SRP051959_kidney 24 .78 RPM
SRP051959_heart 15 .30 RPM
SRP051959_colon 29 .49 RPM



Species Parental gene accession Homology type Retrogenes number
Ciona intestinalis ENSCING00000004542 ortholog_many2many 1 retrogene
retro_cint_3,
Callithrix jacchus ENSCJAG00000009147 within_species_paralog 7 retrogenes
retro_cjac_1062, retro_cjac_1165, retro_cjac_1408, retro_cjac_2304, retro_cjac_2535, retro_cjac_3288, retro_cjac_822,
Dasypus novemcinctus ENSDNOG00000007986 ortholog_one2one 3 retrogenes
retro_dnov_2565, retro_dnov_525, retro_dnov_872,
Drosophila melanogaster FBgn0003134 ortholog_many2many 5 retrogenes
retro_dmel_21, retro_dmel_37, retro_dmel_42, retro_dmel_48, retro_dmel_81,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_923 97.96 100.00
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Download FASTA sequences of all ENSCJAG00000000983 retrocopies