Parental gene:

ENSCJAG00000034702

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:12:76042584..76060903(+)


>ENSCJAG00000034702
AAATTCAGTTCATGCTCGACAATTTTCCTTGAAGACAGTACAGCCAGCTGCCCTCATTTTGAAACGACACTAAAATCTGT
CGCCTTGGACTTCTATTTTCTTATCAAGGACAGAGAAGGATATCTGTCTTACAAAATATTTGATGAACATGCATACCCAT
TGAAATACAGAACAGAAGAATACATTATGTATGATCCTTCAGAGACAATGATTTACAAATTTATACGTACCCTGTTTTAT
GTAAAAAGTCTAAAGGTTGCTGTCGCCATCATAATTATGGTGTACATCCAAAGACTTATACGGTATTCTCGTATCTACAT
TTGTTCAGCCACCTGGAGGAGGATTATCCTCGGAGCCATTCTTGTTGCCATCAAGGTTCGGAGCAATGTACCTGTGTGCA
ATAAAGACTTGTGCAGGCGCTTTGAGAAAACTACAGTTGACGATCTGAATAAGTTGGAAATGAACTTCTTGGAGCTAATT
AATTATGATACTAACGTTTCTAAAAGCATTTATACCGTATACTACTTCCGTCTTCGTGACCTTGTATACACGTATGGCCT
GGGTTCGCCTATTTGCCTTCTTGACACACAAAGAGCATGGGATCTGCAGGCTTTATCAAGGATGGAACAAGACGAAGTGT
TCTATACTGCTTGCAAGACCGGGTCTTTGAGCGTTGATGACTTAACTAGTCTTCAGCGCGCTAAGGCCATCCTCTCCTGA

Library Parental gene expression (RPM)
SRP051959_colon 3 .46 RPM
SRP051959_heart 5 .19 RPM
SRP051959_kidney 6 .59 RPM
SRP051959_liver 6 .30 RPM
SRP051959_lung 5 .21 RPM
SRP051959_lymph_node 7 .17 RPM
SRP051959_skeletal_muscle 2 .58 RPM
SRP051959_spleen 6 .95 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000001008 within_species_paralog 1 retrogene
retro_cjac_3555,
Callithrix jacchus ENSCJAG00000002901 within_species_paralog 1 retrogene
retro_cjac_569,
Callithrix jacchus ENSCJAG00000011445 within_species_paralog 1 retrogene
retro_cjac_1164,
Homo sapiens ENSG00000163249 possible_ortholog 3 retrogenes
retro_hsap_1629, retro_hsap_1984, retro_hsap_4845,
Mus musculus ENSMUSG00000070871 possible_ortholog 1 retrogene
retro_mmus_3072,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_610 69.13 62.34
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Download FASTA sequences of all ENSCJAG00000034702 retrocopies