Parental gene: | SLBP, ENSCPOG00000000031 |
| Aliases: | None |
| Description: | None |
| Organism: | Guinea Pig (Cavia porcellus) |
| Coordinates: | scaffold_24:30492..45172(-) |
>ENSCPOG00000000031
ATGGCCTGCCGGCCGCGAAGTCCGCCTAGTTACGCCAGGACCGACCGCGCGCCCCGCAGCCCGCCATCTTCCGCGCGATG
GAACCTCGGGCGTAAGCGCAGAGCCGACGGGAGGCGCCGGAAACCAGAGGAGGACGAGCACCGCGTCGATCACAGGCCCG
AGAGCTTTACCACTCCTGAAGCCCATAAGACCCGATCTAGATGCTCAGACTGGGCAAGTGCAGTTGAAGAAGATGAAATG
AGGACCAGAGTTAACAAAGAAATTGCCAGGTATAAAAGAAAACTCCTCATAAATGACTTTGGGAGAGAGAGAAAATCTTC
GTCAGGAAGTTCTGACTCAAAGGAGTCTACCTGTGCAGTGCCTGCTGATGTGGAGACGGATGAAAGTGTCCTCATGAGAA
GACAGAAGCAGATCAACTATGGGAAGAACACCATTGCCTATGACCGCTATATTAAAGAAGTTCCTAGACACCTTCGACAA
CCTGGCATCCATCCCAAGACCCCCAATAAATTTAAGAAGTACAGTCGGCGATCCTGGGACCAGCAGATCAAGCTCTGGAA
GGTGGCACTGCACTTTTGGGACCCTCCTGCTGAAGAAGGATGTGATTTGCAAGAAATACACCCTGTGGACCTGGGGGAAA
TGGAAACTGAATTCATAGAAAGCAGCTCTGAGTCCCAGGCGAGTTCGCAGGATAACTCCGATGTTTACGCTGGAACACCC
ACCAAAGTCAGACACATGGACTGCCAAGTAGAAGATGAATTTGATTTGGAAGCTTGTTTGACTGAACCTCTGAAAGACTT
CTCCACCATGAGCTAA
ATGGCCTGCCGGCCGCGAAGTCCGCCTAGTTACGCCAGGACCGACCGCGCGCCCCGCAGCCCGCCATCTTCCGCGCGATG
GAACCTCGGGCGTAAGCGCAGAGCCGACGGGAGGCGCCGGAAACCAGAGGAGGACGAGCACCGCGTCGATCACAGGCCCG
AGAGCTTTACCACTCCTGAAGCCCATAAGACCCGATCTAGATGCTCAGACTGGGCAAGTGCAGTTGAAGAAGATGAAATG
AGGACCAGAGTTAACAAAGAAATTGCCAGGTATAAAAGAAAACTCCTCATAAATGACTTTGGGAGAGAGAGAAAATCTTC
GTCAGGAAGTTCTGACTCAAAGGAGTCTACCTGTGCAGTGCCTGCTGATGTGGAGACGGATGAAAGTGTCCTCATGAGAA
GACAGAAGCAGATCAACTATGGGAAGAACACCATTGCCTATGACCGCTATATTAAAGAAGTTCCTAGACACCTTCGACAA
CCTGGCATCCATCCCAAGACCCCCAATAAATTTAAGAAGTACAGTCGGCGATCCTGGGACCAGCAGATCAAGCTCTGGAA
GGTGGCACTGCACTTTTGGGACCCTCCTGCTGAAGAAGGATGTGATTTGCAAGAAATACACCCTGTGGACCTGGGGGAAA
TGGAAACTGAATTCATAGAAAGCAGCTCTGAGTCCCAGGCGAGTTCGCAGGATAACTCCGATGTTTACGCTGGAACACCC
ACCAAAGTCAGACACATGGACTGCCAAGTAGAAGATGAATTTGATTTGGAAGCTTGTTTGACTGAACCTCTGAAAGACTT
CTCCACCATGAGCTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 13 .28 RPM |
| SRP017611_kidney | 15 .70 RPM |
| SRP017611_brain | 17 .25 RPM |
| SRP040447_lung | 23 .08 RPM |
| SRP040447_skeletal_muscle | 6 .63 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000001328 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000004642 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000009750 | ortholog_one2one | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000002807 | ortholog_one2one | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000037162 | ortholog_one2one | 2 retrogenes | |
| Tarsius syrichta | ENSTSYG00000000376 | ortholog_one2one | 2 retrogenes | |
| Tursiops truncatus | ENSTTRG00000010901 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cpor_364 | 70.00 | 50.18 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCPOG00000000031 retrocopies