Parental gene: | SLC30A9, ENSCPOG00000000374 |
| Aliases: | None |
| Description: | None |
| Organism: | Guinea Pig (Cavia porcellus) |
| Coordinates: | scaffold_24:16095052..16124026(+) |
>ENSCPOG00000000374
ATGTTACCGGGCTTGGCCGCCGCCACTACGGCCCACAGATGTAGCTGGTCTTTTCTGTGTCGGCTCCGCTTGAGCTGCAG
GGCCGCGTGCCGCGGCTCCAGCGACCGCCGGGTAGAATGGCAGAATTTGGTGACATTTGGAAACTTTGCATGCATGGTTC
CCTATCGTCACCCACATATTTGTACACTGAGCCAAATAAAGTTGTACTCTACAAATATCCAGAAAGAAGGGCAGGGATCA
CAAACACACAGAGTAGAAAAGGTACCATCTTTTGGTGAAACAGCAGAAAATATAGGTGCAGAACTCAAAGCTCCACTAAA
GCAAGAACCTCTCCAAGTAAGGGTCAAAGCAGTTCTTAAGAAAAGGGAGTATGGATCAAAATACACTCAGAATAATTTCA
TCACTGGAGTCAGAGCAATAAATGAGTTCTGCCTCAAATCCAGTGATCTAGAACAGCTTCGAAAAATCAGACGACGAAGT
CCCCATGAAGATACTGAGTCCTTTACTGTATATTTGAGATCAGATGTGGAGGCCAAATCTTTGGAGGTTTGGGGAAGTCC
TGAAGCTCTTGCTAGAGAGAAAAAGCTACGTAAGGAAGCAGAAATAGAATATAGAGAACGTAACACATACAACTACCAAA
AATTACTTTCT
ATGTTACCGGGCTTGGCCGCCGCCACTACGGCCCACAGATGTAGCTGGTCTTTTCTGTGTCGGCTCCGCTTGAGCTGCAG
GGCCGCGTGCCGCGGCTCCAGCGACCGCCGGGTAGAATGGCAGAATTTGGTGACATTTGGAAACTTTGCATGCATGGTTC
CCTATCGTCACCCACATATTTGTACACTGAGCCAAATAAAGTTGTACTCTACAAATATCCAGAAAGAAGGGCAGGGATCA
CAAACACACAGAGTAGAAAAGGTACCATCTTTTGGTGAAACAGCAGAAAATATAGGTGCAGAACTCAAAGCTCCACTAAA
GCAAGAACCTCTCCAAGTAAGGGTCAAAGCAGTTCTTAAGAAAAGGGAGTATGGATCAAAATACACTCAGAATAATTTCA
TCACTGGAGTCAGAGCAATAAATGAGTTCTGCCTCAAATCCAGTGATCTAGAACAGCTTCGAAAAATCAGACGACGAAGT
CCCCATGAAGATACTGAGTCCTTTACTGTATATTTGAGATCAGATGTGGAGGCCAAATCTTTGGAGGTTTGGGGAAGTCC
TGAAGCTCTTGCTAGAGAGAAAAAGCTACGTAAGGAAGCAGAAATAGAATATAGAGAACGTAACACATACAACTACCAAA
AATTACTTTCT
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 8 .23 RPM |
| SRP017611_kidney | 15 .49 RPM |
| SRP017611_brain | 20 .59 RPM |
| SRP040447_lung | 4 .82 RPM |
| SRP040447_skeletal_muscle | 3 .72 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000019226 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000000501 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000002246 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000008801 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000024271 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cpor_805 | 53.85 | 87.56 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCPOG00000000374 retrocopies