Parental gene:

PRELID2, ENSCPOG00000001222

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_6:7927267..8029514(-)


>ENSCPOG00000001222
ATGGGCGTCACGGTGGACGTGCACCAGGTGTACAAGTACCCCTTCGAGCAGGTGGTCGCCAGCTTCCTGCGGAAGTATCC
CAACCCCATGGATAAAAATGTCATCTCTGTAAAAATTGTGGAGGAAAGAAAAGATGAAACAACAGGAATCATCTATAGAA
AGAGGATTGCAATCTGTCAGAATGTGATTCCAGAAATTTTAAGGAAGGTAAATTCATTTCCAAATGTGACTACAGTGGGA
CAGGTGAGCATTTTAAAGGTACCTACTGTCCAGTTAGAAGAAGAATCATGGCTCAATCTTCAGGAAAGAAACATGGCTAT
ACGGAGTCACTGCCTTACATGGACACAGTACGCATCCCTGAAGGAAGAGTCTGTCTTCAGGGAAAGTATGGAAAATCCAA
ATTGGACAGAGTTCATTCAAAGAGGCAGGATTTCAATCACAGGGGCTGGATTTCTCAACTATATTTTGGAAACTTTTGCC
AGCACTTTCTTAAGACAGGGAGCCCAGAAGGGAATTAGAATAATGGAGATGCTGCTGAAGGAACAGTGTGGTGCCCCCTT
AGCCGAA

Library Parental gene expression (RPM)
SRP017611_liver 0 .17 RPM
SRP017611_kidney 0 .31 RPM
SRP017611_brain 0 .98 RPM
SRP040447_lung 1 .44 RPM
SRP040447_skeletal_muscle 0 .89 RPM



Species Parental gene accession Homology type Retrogenes number
Echinops telfairi ENSETEG00000005000 ortholog_one2one 2 retrogenes
retro_etel_1464, retro_etel_1676,
Homo sapiens ENSG00000186314 ortholog_one2one 1 retrogene
retro_hsap_1134,
Macaca mulatta ENSMMUG00000013588 ortholog_one2one 1 retrogene
retro_mmul_877,
Mus musculus ENSMUSG00000056671 ortholog_one2one 1 retrogene
retro_mmus_1260,
Nomascus leucogenys ENSNLEG00000009800 ortholog_one2one 1 retrogene
retro_nleu_928,
Otolemur garnettii ENSOGAG00000010025 ortholog_one2one 2 retrogenes
retro_ogar_2400, retro_ogar_2477,
Pan troglodytes ENSPTRG00000017368 ortholog_one2one 1 retrogene
retro_ptro_770,
Tursiops truncatus ENSTTRG00000016708 ortholog_one2one 1 retrogene
retro_ttru_1875,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_821 79.65 57.67
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Download FASTA sequences of all ENSCPOG00000001222 retrocopies