Parental gene:

ZFAND5, ENSCPOG00000005076

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_21:23429049..23433387(-)


>ENSCPOG00000005076
CAAACAAGGATGGCTCAGGAGACTAACCAGACCCCAGGGCCCATGCTGTGTAGTACAGGATGTGGCTTTTATGGGAACCC
TAGGACAAATGGAATGTGTTCTGTTTGCTACAAAGAACATCTTCAGAGGCAGCAAAATAGTGGCAGAATGAGCCCAATGG
GGACAGCTAGTGGTTCCAACAGTCCTACCTCAGATTCTGCATCTGTACAGAGAGCAGACACAAGCTTAAACAACTGTGAA
GGTGCTGCTGGCAGCACATCTGAAAAATCAAGAAATGTGCCTGTGGCTGCCTTGCCTGTAACTCAGCAAATGACAGAAAT
GAGCATTTCAAGAGAGGACAAAATAACTACCCCGAAAACAGAGGTGTCAGAGCCAGTTGTTACTCAGCCCAGTCCATCAG
TTTCTCAGCCCAGTACTTCTCAAAGTGAAGAAAAAGCTCCTGAATTGCCCAAACCAAAGAAGAACAGATGTTTCATGTGT
AGAAAGAAAGTTGGCCTTACAGGATTTGACTGCCGATGTGGAAATTTGTTTTGTGGACTTCACCGTTACTCTGACAAGCA
CAACTGTCCATATGATTACAAAGCAGAAGCAGCAGCAAAAATCAGAAAAGAAAACCCAGTTGTTGTGGCTGAAAAAATCC
AGAGAATA

Library Parental gene expression (RPM)
SRP017611_brain 68 .85 RPM
SRP017611_kidney 28 .89 RPM
SRP017611_liver 36 .82 RPM
SRP040447_lung 39 .02 RPM
SRP040447_skeletal_muscle 54 .82 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000002366 ortholog_one2one 2 retrogenes
retro_chof_1050, retro_chof_1846,
Felis catus ENSFCAG00000027317 ortholog_one2one 1 retrogene
retro_fcat_641,
Homo sapiens ENSG00000107372 ortholog_one2one 1 retrogene
retro_hsap_2063,
Gorilla gorilla ENSGGOG00000008957 ortholog_one2one 1 retrogene
retro_ggor_1485,
Myotis lucifugus ENSMLUG00000007173 ortholog_one2one 2 retrogenes
retro_mluc_1233, retro_mluc_1993,
Monodelphis domestica ENSMODG00000004426 possible_ortholog 1 retrogene
retro_mdom_1910,
Mustela putorius furo ENSMPUG00000008951 ortholog_one2one 1 retrogene
retro_mputfur_143,
Mus musculus ENSMUSG00000024750 ortholog_one2one 1 retrogene
retro_mmus_1176,
Oryctolagus cuniculus ENSOCUG00000000795 ortholog_one2one 1 retrogene
retro_ocun_1546,
Procavia capensis ENSPCAG00000007436 ortholog_one2one 1 retrogene
retro_pcap_112,
Pongo abelii ENSPPYG00000019290 ortholog_one2one 1 retrogene
retro_pabe_1676,
Vicugna pacos ENSVPAG00000000700 ortholog_one2many 1 retrogene
retro_vpac_23,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_774 77.63 100.00
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2. retro_cpor_1398 79.26 100.00
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Download FASTA sequences of all ENSCPOG00000005076 retrocopies