Parental gene: | ARL5B, ENSCPOG00000005856 |
| Aliases: | None |
| Description: | None |
| Organism: | Guinea Pig (Cavia porcellus) |
| Coordinates: | scaffold_91:6406350..6414139(-) |
>ENSCPOG00000005856
CTGTGCCTGTATTTTGCCAACCTTTGGAGCAGCTTCTGCTATATAGAACACAAAGTAATTATAGTGGGACTGGATAATGC
AGGGAAAACCACCATTCTTTATCAATTCTTAATGAATGAAGTGGTTCATACTTCTCCAACCATAGGAAGCAATGTGGAAG
AAATAGTTGTGAAAAACACTCATTTTCTTATGTGGGATATTGGGGGACAAGAGTCACTGCGGTCATCCTGGAACACATAT
TACTCAAACACAGAGTTCATCATTCTTGTAGTTGACAGCATTGACAGGGAGCGACTAGCTATTACGAAAGAAGAATTATA
CAGAATGTTGGCTCATGAGGATTTAAGGAAGGCTGCAGTGCTTATCTTTGCAAACAAACAGGATATGAAAGGGTGCATGA
CTGCAGCTGAAATCTCTAAATACCTCACTCTTAGTTCAATTAAGGATCATCCATGGCACATTCAGTCCTGCTGTGCTTTA
ACAGGAGAAGGGTTATGCCAAGGTCTGGAATGGATGACTTCCCGGATTGGCGTGAGATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 2 .53 RPM |
| SRP017611_kidney | 1 .67 RPM |
| SRP017611_liver | 2 .61 RPM |
| SRP040447_lung | 0 .88 RPM |
| SRP040447_skeletal_muscle | 1 .21 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Cavia porcellus | ENSCPOG00000005209 | within_species_paralog | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000007453 | ortholog_one2one | 3 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000014876 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000027859 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cpor_558 | 77.97 | 98.88 | Please wait, loading  |
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| 2. | retro_cpor_747 | 63.16 | 52.51 | Please wait, loading |
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Download FASTA sequences of all ENSCPOG00000005856 retrocopies