Parental gene:

ENSCPOG00000007690

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_3:38202536..38214397(+)


>ENSCPOG00000007690
GTGCTCTCTAACAGGGCCAGACTGGTTTCTTACCTCCCTGGATTTTACTCGTTAGTTAAAAGAGTTGTCAACCCAAGAGC
CTTTTCAACAGCAGGATCTTCAGGTTCTGATGAGTCTCATGTGGCCACCTCATCCCCAGATATATGCTCTCGAACAGTGT
GGCCTGATGAAACTATGGGACCTTTTGGACCTCAAGATCAGCGTTTCCAGCTTCCTGGGAATGTAGGCTTTGAGTGTCAT
CTCAATGGGACTGCTGTACAAAAGAAAAGCCAAGGTCATAAAATTTTACCTGATGTTCTGGCAGAACCTTTATCAACTGA
AAGACATGAGTTTGTGATGGCGCAATATGTTAATGAATTTCAGGGTAATAATGAGCCTGTAGAACAAGAAATTAACAGTG
CAGAAACTTATTTCGAAAGTGCCAGAGTAGAGTGTGTAATCCAGACATGTCCAGAATTGCTTCGGAGAGACTTTGAATCA
CTATTTCCAGAAGTGGCTAATGGCAAACTAATGATTCTGACTGTAACTCAGAAAACTAAGAATGATATGACTGTTTGGAG
TGAGGAGGTAGAACTTGAAAGAGAAACACTCTTAGAAAAGTTCATTAATGGTGCTAAGGAAATTTGCTATGCTCTTCGAG
CAGAAGGCTACTGGGCTGACTTCATTGACCCATCATCTGGTGTGGCATTTTTTGGACCATATTCAAACAACACTCTTTTT
GAAACAGATGAACGCTACCGACATTTAGGGTTCTCTGTTGATGATCTTGGCTGCTGCAAAGTAATCCGCCATAATCTCTG
GGGTACCCATGTGTTTGTAGGAAGTATCTTCACTAACGCAACACCAGACAGCCATATTATGAAGAAATTAAGTGGAAAT

Library Parental gene expression (RPM)
SRP017611_liver 27 .81 RPM
SRP017611_kidney 39 .89 RPM
SRP017611_brain 11 .04 RPM
SRP040447_lung 21 .99 RPM
SRP040447_skeletal_muscle 38 .49 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000003086 ortholog_one2many 2 retrogenes
retro_cjac_4082, retro_cjac_4101,
Homo sapiens ENSG00000168288 ortholog_one2many 2 retrogenes
retro_hsap_4716, retro_hsap_865,
Gorilla gorilla ENSGGOG00000027348 ortholog_one2many 1 retrogene
retro_ggor_704,
Macaca mulatta ENSMMUG00000005633 ortholog_one2many 1 retrogene
retro_mmul_1058,
Monodelphis domestica ENSMODG00000003566 ortholog_one2many 2 retrogenes
retro_mdom_1749, retro_mdom_620,
Mustela putorius furo ENSMPUG00000000323 ortholog_one2many 1 retrogene
retro_mputfur_1253,
Nomascus leucogenys ENSNLEG00000010795 ortholog_one2many 2 retrogenes
retro_nleu_1988, retro_nleu_426,
Otolemur garnettii ENSOGAG00000034385 ortholog_one2many 4 retrogenes
retro_ogar_3266, retro_ogar_356, retro_ogar_688, retro_ogar_813,
Pan troglodytes ENSPTRG00000012525 ortholog_one2many 1 retrogene
retro_ptro_599,
Ictidomys tridecemlineatus ENSSTOG00000021576 ortholog_one2many 1 retrogene
retro_itri_1809,
Tarsius syrichta ENSTSYG00000009075 ortholog_one2many 1 retrogene
retro_tsyr_1690,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_30 99.66 100.00
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Download FASTA sequences of all ENSCPOG00000007690 retrocopies