Parental gene:

NDPK-A, ENSCPOG00000008413

Aliases:None
Description:nucleoside diphosphate kinase A [Source:RefSeq peptide;Acc:NP_001166344]
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_53:6812834..6821597(-)


>ENSCPOG00000008413
TTCATCCCTCACTTTCCTGTCCCCAGGACCATGGCCAGCAGTGAGCGGACCTTCATTGCCATCAAGCCGGATGGTGTCCA
GCGGGGACTTGTGGGAGACATCATCAAACGCTTTGAGCAGAAGGGATTCCGCCTTGTGGCCCTGAAACTTATACAGGCCT
CGGAGGAGCACCTGAAGCAGCACTACAGCGACCTGAAGGAGCGGCCCTTCTTCTCCGGCTTGGTGCAGTACATGCACTCG
GGACCTGTGGTCGCCATGGTCTGGGAGGGGCTGAACGTGGTGAAGACTGGCCGAGTGATGCTGGGTGAGACCAACCCTGC
CGACTCCAAGCCAGGCACCATCCGAGGGGATTTCTGCATCCAAGTGGGCAGGAACATCATCCATGGCAGCGACTCAGTGC
AGAGTGCAGAGAAGGAGATTGGCCTGTGGTTTAAGCCCGAGGAGCTGGTGGACTACAGGAGCTGTGCCCACAACTGGATC
TATGAG

Library Parental gene expression (RPM)
SRP017611_liver 82 .40 RPM
SRP017611_kidney 149 .18 RPM
SRP017611_brain 55 .73 RPM
SRP040447_lung 146 .58 RPM
SRP040447_skeletal_muscle 144 .69 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000023628 possible_ortholog 7 retrogenes
retro_cfam_117, retro_cfam_1645, retro_cfam_37, retro_cfam_676, retro_cfam_69, retro_cfam_832, retro_cfam_96,
Cavia porcellus ENSCPOG00000006496 within_species_paralog 1 retrogene
retro_cpor_1076,
Echinops telfairi ENSETEG00000005563 ortholog_one2one 4 retrogenes
retro_etel_242, retro_etel_547, retro_etel_71, retro_etel_803,
Mus musculus ENSMUSG00000091228 ortholog_one2one 3 retrogenes
retro_mmus_2712, retro_mmus_3081, retro_mmus_581,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_599 68.52 64.60
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Download FASTA sequences of all ENSCPOG00000008413 retrocopies