Parental gene: | CCT3, ENSCPOG00000009131 |
| Aliases: | None |
| Description: | None |
| Organism: | Guinea Pig (Cavia porcellus) |
| Coordinates: | scaffold_10:16893342..16908700(-) |
>ENSCPOG00000009131
ATGATGGGCCACCGTCCCGTGCTCGTGCTCAGCCAGAATACAAAGCGTGAATCTGGAAGAAAAGTTCAGTCTGGAAACAT
CAGTGCTGCTAAGACTATTGCAGATATCATTCGAACATGTTTGGGACCCAAGTCCATGATGAAGATGCTTTTGGATCCAA
TGGGAGGCATCGTGATGACCAATGATGGCAATGCTATTCTTCGGGAGATTCAAGTCCAGCATCCAGCAGCCAAGTCAATG
ATTGAAATTAGCCGGACGCAAGATGAAGAGGTTGGAGATGGAACTACATCAGTAATTATTCTTGCGGGAGAGATGTTGTC
TGTGGCTGAGCACTTCCTGGAGCAGCAGATGCACCCAACAGTGGTGATCAGTGCTTATCGCAAAGCACTAGATGATATGA
TCAGCACTCTAAAGAAAATCAGCACCCCTGTTGACATCAATAACCGTGATACGATGTTGAACATCATCAATAGCTCCATT
ACTACCAAAGCAATTAGTCGGTGGTCTTCTTTGGCTTGTAATATTGCCCTGGATGCTGTCAAGACCGTACAGTTTGAGGA
GAATGGTCGGAAAGAGATCGACATCAAAAAATATGCAAGAGTGGAAAAGATACCTGGGGGCATCATTGAAGACTCCTGTG
TCCTACGTGGCGTCATGATTAACAAGGATGTGACCCATTCACGAATGAGGCGCTATATAAAGAACCCTCGAATCGTGCTG
CTGGATTCATCTTTGGAATATAAGAAAGGAGAAAGCCAGACCGACATTGAGATTACACGAGAGGAAGACTTTGCCCGAAT
CCTCCAGATGGAAGAAGAATACATCCAGCAGCTCTGCGAAGACATCATCCAGTTGAAGCCTGATGTGGTCATCACAGAAA
AGGGCATTTCAGATTTAGCTCAGCACTACCTCTTGCGAGCCAATATCACAGCTATCCGTAGAGTTCGGAAGACAGACAAT
AACCGGATTGCTAGAGCCTGTGGGGCCCGCATAGTCAGCCGACCAGAAGAGCTGAGAGAAGATGATGTTGGCACCGGAGC
AGGCCTGCTGGAAATCAAGAAAATTGGAGATGAGTACTTCACATTCATCACTGAATGCAAAGACCCCAAGGCCTGTACCA
TTCTCCTCAGAGGAGCCAGCAAAGAAATTCTCTCGGAAGTAGAGCGCAACCTACAGGATGCTATGCAGGTGTGCCGCAAT
GTACTTCTAGACCCTCAGCTGGTGCCAGGAGGTGGAGCCTCTGAGATGGCTGTGGCCCATGCCTTGACAGAAAAATCCAA
GGCCATGACTGGTGTGGAGCAATGGCCCTACAGGGCTGTAGCCCAGGCTCTGGAGGTCATCCCTCGCACGCTCATCCAGA
ACTGTGGTGCCAGCACCATCCGTCTATTGACCTCCCTTCGGGCCAAACACACACAGGAAGGCTGTGAGACCTGGGGTGTA
AATGGAGAGACAGGGGCTTTGGTGGACATGAAGGAACTGGGCATATGGGAGCCTTTGGCTGTGAAGCTACAAACATACAA
GACAGCAGTGGAGACGGCAGTGCTGTTGCTGAGGATTGATGACATCGTCTCAGGCCACAAAAAGAAGAGTGATGATCAGA
GCCGGCAAGGCGGGGCTCCTGATGCTGGCCAAGAGTGA
ATGATGGGCCACCGTCCCGTGCTCGTGCTCAGCCAGAATACAAAGCGTGAATCTGGAAGAAAAGTTCAGTCTGGAAACAT
CAGTGCTGCTAAGACTATTGCAGATATCATTCGAACATGTTTGGGACCCAAGTCCATGATGAAGATGCTTTTGGATCCAA
TGGGAGGCATCGTGATGACCAATGATGGCAATGCTATTCTTCGGGAGATTCAAGTCCAGCATCCAGCAGCCAAGTCAATG
ATTGAAATTAGCCGGACGCAAGATGAAGAGGTTGGAGATGGAACTACATCAGTAATTATTCTTGCGGGAGAGATGTTGTC
TGTGGCTGAGCACTTCCTGGAGCAGCAGATGCACCCAACAGTGGTGATCAGTGCTTATCGCAAAGCACTAGATGATATGA
TCAGCACTCTAAAGAAAATCAGCACCCCTGTTGACATCAATAACCGTGATACGATGTTGAACATCATCAATAGCTCCATT
ACTACCAAAGCAATTAGTCGGTGGTCTTCTTTGGCTTGTAATATTGCCCTGGATGCTGTCAAGACCGTACAGTTTGAGGA
GAATGGTCGGAAAGAGATCGACATCAAAAAATATGCAAGAGTGGAAAAGATACCTGGGGGCATCATTGAAGACTCCTGTG
TCCTACGTGGCGTCATGATTAACAAGGATGTGACCCATTCACGAATGAGGCGCTATATAAAGAACCCTCGAATCGTGCTG
CTGGATTCATCTTTGGAATATAAGAAAGGAGAAAGCCAGACCGACATTGAGATTACACGAGAGGAAGACTTTGCCCGAAT
CCTCCAGATGGAAGAAGAATACATCCAGCAGCTCTGCGAAGACATCATCCAGTTGAAGCCTGATGTGGTCATCACAGAAA
AGGGCATTTCAGATTTAGCTCAGCACTACCTCTTGCGAGCCAATATCACAGCTATCCGTAGAGTTCGGAAGACAGACAAT
AACCGGATTGCTAGAGCCTGTGGGGCCCGCATAGTCAGCCGACCAGAAGAGCTGAGAGAAGATGATGTTGGCACCGGAGC
AGGCCTGCTGGAAATCAAGAAAATTGGAGATGAGTACTTCACATTCATCACTGAATGCAAAGACCCCAAGGCCTGTACCA
TTCTCCTCAGAGGAGCCAGCAAAGAAATTCTCTCGGAAGTAGAGCGCAACCTACAGGATGCTATGCAGGTGTGCCGCAAT
GTACTTCTAGACCCTCAGCTGGTGCCAGGAGGTGGAGCCTCTGAGATGGCTGTGGCCCATGCCTTGACAGAAAAATCCAA
GGCCATGACTGGTGTGGAGCAATGGCCCTACAGGGCTGTAGCCCAGGCTCTGGAGGTCATCCCTCGCACGCTCATCCAGA
ACTGTGGTGCCAGCACCATCCGTCTATTGACCTCCCTTCGGGCCAAACACACACAGGAAGGCTGTGAGACCTGGGGTGTA
AATGGAGAGACAGGGGCTTTGGTGGACATGAAGGAACTGGGCATATGGGAGCCTTTGGCTGTGAAGCTACAAACATACAA
GACAGCAGTGGAGACGGCAGTGCTGTTGCTGAGGATTGATGACATCGTCTCAGGCCACAAAAAGAAGAGTGATGATCAGA
GCCGGCAAGGCGGGGCTCCTGATGCTGGCCAAGAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 121 .27 RPM |
| SRP017611_kidney | 148 .34 RPM |
| SRP017611_brain | 93 .81 RPM |
| SRP040447_lung | 161 .01 RPM |
| SRP040447_skeletal_muscle | 127 .95 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000005776 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000001416 | ortholog_one2one | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000008967 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000019090 | ortholog_one2many | 2 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000001798 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cpor_813 | 59.42 | 50.09 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCPOG00000009131 retrocopies