Parental gene: | Cct3, ENSRNOG00000019090 |
| Aliases: | None |
| Description: | T-complex protein 1 subunit gamma [Source:UniProtKB/Swiss-Prot;Acc:Q6P502] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 2:207072067..207096552(+) |
>ENSRNOG00000019090
ATGATGGGCCACCGTCCAGTGCTCGTGCTCAGTCAGAATACAAAGCGTGAGTCTGGAAGAAAAGTTCAATCTGGAAATAT
CAATGCTGCAAAGACAATTGCAGACATCATCCGGACCTGTTTGGGACCTAAATCTATGATGAAGATGCTTTTGGATCCAA
TGGGAGGCATCGTGATGACCAATGATGGTAATGCCATTCTTCGAGAGATTCAAGTCCAGCATCCCGCAGCAAAATCCATG
ATTGAAATTAGCAGGACCCAGGATGAAGAGGTTGGAGATGGGACCACATCAGTAATTATTCTTGCTGGAGAAATGCTGTC
TGTGGCTGAGCACTTCCTAGAGCAGCAGATGCACCCAACAGTGGTGATCAGTGCTTACCGCATGGCACTGGATGATATGG
TCAGCACTCTGAAGAAAATCAGTACCCCTGTTGATGTCAATAACCGTGATATGATGTTGAACATCATCAATAGCTCTATT
ACTACAAAAGTCATCAGTCGGTGGTCCTCTTTGGCATGCAACATTGCACTGGATGCTGTTAAGACTGTTCAGTTTGAAGA
GAATGGCAGAAAGGAAATTGATATCAAGAAGTATGCAAGGGTGGAAAAGATACCCGGGGGCATCATTGAAGACTCGTGTG
TCTTACGTGGAGTTATGATCAACAAGGATGTGACCCATCCAAGAATGCGCCGCTATATTAAGAATCCTCGAATTGTTCTA
CTGGATTCTTCTCTGGAGTACAAGAAAGGAGAAAGCCAGACTGACATTGAGATTACACGAGAGGAGGATTTCACCCGCAT
CCTGCAAATGGAAGAAGAGTACATCCAGCAGTTGTGTGAGGATATTATCCAGCTGAAACCTGACGTAGTCATCACAGAAA
AGGGCATCTCGGATTTAGCTCAGCACTACCTCATGCGGGCCAATGTCACAGCCATTCGTAGAGTCCGGAAAACAGACAAT
AATCGCATTGCTAGAGCCTGTGGGGCACGGATAGTCAGCCGACCCGAGGAACTGAGAGAAGATGATGTTGGTACAGGAGC
AGGCTTATTGGAAATCAAGAAGATTGGAGATGAGTACTTCACATTCATCACTGACTGCAAAGACCCAAAGGCCTGCACCA
TTCTTCTTAGAGGAGCCAGCAAAGAGATACTATCGGAAGTAGAACGCAACCTCCAGGATGCCATGCAAGTGTGCCGCAAT
GTTCTCCTGGACCCTCAGCTGGTGCCTGGTGGTGGAGCCTCTGAGATGGCTGTGGCCCATGCCTTGACAGAAAAATCTAA
GGCCATGACTGGTGTGGAACAATGGCCATATAGGGCTGTGGCCCAGGCTTTAGAGGTCATCCCTCGGACCTTGATCCAGA
ACTGTGGGGCCAGTACCATTCGTCTGCTTACCTCCCTTCGGGCCAAGCACACACAGGAGAATTGTGAGACCTGGGGTGTG
AATGGTGAGACTGGTACCTTAGTGGACATGAAAGAGCTGGGTATTTGGGAGCCATTGGCTGTGAAGCTACAAACATACAA
AACAGCAGTGGAGACTGCAGTTCTGCTTCTGCGGATTGATGACATTGTCTCTGGCCACAAGAAGAAGGGTGATGACCAGA
ACCGGCAAACCGGTGCTCCAGATGCTGGCCAGGAGTGA
ATGATGGGCCACCGTCCAGTGCTCGTGCTCAGTCAGAATACAAAGCGTGAGTCTGGAAGAAAAGTTCAATCTGGAAATAT
CAATGCTGCAAAGACAATTGCAGACATCATCCGGACCTGTTTGGGACCTAAATCTATGATGAAGATGCTTTTGGATCCAA
TGGGAGGCATCGTGATGACCAATGATGGTAATGCCATTCTTCGAGAGATTCAAGTCCAGCATCCCGCAGCAAAATCCATG
ATTGAAATTAGCAGGACCCAGGATGAAGAGGTTGGAGATGGGACCACATCAGTAATTATTCTTGCTGGAGAAATGCTGTC
TGTGGCTGAGCACTTCCTAGAGCAGCAGATGCACCCAACAGTGGTGATCAGTGCTTACCGCATGGCACTGGATGATATGG
TCAGCACTCTGAAGAAAATCAGTACCCCTGTTGATGTCAATAACCGTGATATGATGTTGAACATCATCAATAGCTCTATT
ACTACAAAAGTCATCAGTCGGTGGTCCTCTTTGGCATGCAACATTGCACTGGATGCTGTTAAGACTGTTCAGTTTGAAGA
GAATGGCAGAAAGGAAATTGATATCAAGAAGTATGCAAGGGTGGAAAAGATACCCGGGGGCATCATTGAAGACTCGTGTG
TCTTACGTGGAGTTATGATCAACAAGGATGTGACCCATCCAAGAATGCGCCGCTATATTAAGAATCCTCGAATTGTTCTA
CTGGATTCTTCTCTGGAGTACAAGAAAGGAGAAAGCCAGACTGACATTGAGATTACACGAGAGGAGGATTTCACCCGCAT
CCTGCAAATGGAAGAAGAGTACATCCAGCAGTTGTGTGAGGATATTATCCAGCTGAAACCTGACGTAGTCATCACAGAAA
AGGGCATCTCGGATTTAGCTCAGCACTACCTCATGCGGGCCAATGTCACAGCCATTCGTAGAGTCCGGAAAACAGACAAT
AATCGCATTGCTAGAGCCTGTGGGGCACGGATAGTCAGCCGACCCGAGGAACTGAGAGAAGATGATGTTGGTACAGGAGC
AGGCTTATTGGAAATCAAGAAGATTGGAGATGAGTACTTCACATTCATCACTGACTGCAAAGACCCAAAGGCCTGCACCA
TTCTTCTTAGAGGAGCCAGCAAAGAGATACTATCGGAAGTAGAACGCAACCTCCAGGATGCCATGCAAGTGTGCCGCAAT
GTTCTCCTGGACCCTCAGCTGGTGCCTGGTGGTGGAGCCTCTGAGATGGCTGTGGCCCATGCCTTGACAGAAAAATCTAA
GGCCATGACTGGTGTGGAACAATGGCCATATAGGGCTGTGGCCCAGGCTTTAGAGGTCATCCCTCGGACCTTGATCCAGA
ACTGTGGGGCCAGTACCATTCGTCTGCTTACCTCCCTTCGGGCCAAGCACACACAGGAGAATTGTGAGACCTGGGGTGTG
AATGGTGAGACTGGTACCTTAGTGGACATGAAAGAGCTGGGTATTTGGGAGCCATTGGCTGTGAAGCTACAAACATACAA
AACAGCAGTGGAGACTGCAGTTCTGCTTCTGCGGATTGATGACATTGTCTCTGGCCACAAGAAGAAGGGTGATGACCAGA
ACCGGCAAACCGGTGCTCCAGATGCTGGCCAGGAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 62 .60 RPM |
| SRP017611_kidney | 126 .24 RPM |
| SRP017611_brain | 95 .33 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000005776 | ortholog_one2many | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000009131 | ortholog_one2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000001416 | ortholog_one2many | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000008967 | ortholog_one2many | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000001798 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_1450 | 89.89 | 50.83 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_rnor_2823 | 75.15 | 61.65 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000019090 retrocopies