Parental gene:

DLST, ENSCPOG00000009316

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_20:18933902..18953714(+)


>ENSCPOG00000009316
ATGCTGTCCCGCTCGCGCTGCGTGTCCCGGGCGTTTAGCCGCTCGCTCGCCGCCTTCCAGAAGGGGAACTGCCCTCTAGG
GAGACGTTCCCTGCCTGGGGTCTCCTTATGTCAGGGACCAAGTTACCCTGACAGCAGGAAGATTGTCATTGACAACAGTA
GTATCTTCAGTGTTCGATATTTCAGAACCACAGCTGTGTGCAAGGATGATGTGATTACAGTCAATACCCCAGCGTTTGCA
GAATCTGTCACAGAGGGAGATGTCAGGTGGGAGAAAGCTGTTGGAGACACAGTTGCAGAAGATGAAGTGGTTTGTGAGAT
TGAAACGGATAAGACATCTGTGCAGGTTCCATCACCAGCAAATGGTGTGATAGAAGCTCTTTTGGTACCTGATGGAGGGA
AAGTTGAAGGAGGCACTCCTCTGTTCACACTCAGGAAAACTGGTGCTGCACCTGTTAAGGCCAAGCCAGCCGAAGGTCCC
ACTGCAGCCCCAAAAGCAGAACCGACAGTGTCAGCAGTTCCTCCTCCCGCTGCTGCCTCCATACCTACTCAGATGCCACC
AGTGCCCTCCCCCTCACAGCCTCCTTCTAGCAAACCAGTCTCTGCCATTAAACCCACAGCTGCACCTCCACTGGCTGATT
CAGGAGCTGGTAGAGGTCTGCGTTCAGAACATCGGGAAAAAATGAACAGGATGCGGCAGCGAATTGCTCAGCGTCTGAAG
GAGGCCCAGAATACATGTGCAATGCTGACTACTTTCAATGAGATTGACATGAGTAACATCCAGGAAATGAGAGCTCGGCA
CAAAGATGCTTTTCTAAAGAAACATAACCTCAAACTAGGCTTTATGTCAGCATTTGTGAAGGCCTCAGCCTTTGCCTTGC
AGGAACAGCCTGTTGTAAATGCAGTGATTGATGATGCAACCAAAGAGGTGGTGTATAGGGACTACATTGATATCAGTGTT
GCAGTGGCCACTCCACGGGGTCTGGTGGTTCCTGTCATCAGGAATGTGGAAACTATGAATTATGCAGATATTGAACGAAC
CATCAGTGAACTGGGAGAGAAGGCCAGAAAGAACGAACTTGCCATTGAAGATATGGATGGTGGTACTTTCACTATTAGCA
ATGGAGGCGTGTTTGGCTCACTCTTTGGAACACCCATCATCAACCCTCCTCAGTCTGCCATCCTTGGCATGCACGCCATT
TTCGACAGACCAGTGGCTGTGGGTGGCAAGGTGGAGGTGCGGCCTATGATGTATGTGGCACTGACCTACGATCACCGGCT
GATTGATGGCAGAGAGGCTGTGACTTTCCTCCGAAAAATCAAGGCAGCGGTAGAGGATCCCAGAGTCCTCCTCCTGGACC
TTTAG

Library Parental gene expression (RPM)
SRP017611_liver 46 .88 RPM
SRP017611_kidney 126 .88 RPM
SRP017611_brain 43 .19 RPM
SRP040447_lung 53 .87 RPM
SRP040447_skeletal_muscle 147 .42 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000119689 ortholog_one2one 1 retrogene
retro_hsap_407,
Gorilla gorilla ENSGGOG00000011591 ortholog_one2one 1 retrogene
retro_ggor_403,
Nomascus leucogenys ENSNLEG00000016330 ortholog_one2one 1 retrogene
retro_nleu_1006,
Oryctolagus cuniculus ENSOCUG00000015606 ortholog_one2one 1 retrogene
retro_ocun_322,
Pan troglodytes ENSPTRG00000006543 ortholog_one2one 1 retrogene
retro_ptro_312,
Tursiops truncatus ENSTTRG00000001915 ortholog_one2one 1 retrogene
retro_ttru_681,
Xenopus tropicalis ENSXETG00000013264 ortholog_one2one 1 retrogene
retro_xtro_46,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_1089 87.77 100.00
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Download FASTA sequences of all ENSCPOG00000009316 retrocopies