Parental gene: | ENSCPOG00000010887 |
| Aliases: | None |
| Description: | None |
| Organism: | Guinea Pig (Cavia porcellus) |
| Coordinates: | scaffold_129:2436952..2462216(+) |
>ENSCPOG00000010887
CAAGAAGGATCACTTTGTGCTCAACACTGCCTGAATAATCTGTTGCAAGGAGAATACTTTAGCCCTGTGGAGTTATCCTC
AATTGCCCACCAGCTGGATGAGGAAGAAAGGATGAGAATGGCAGAAGGAGGCGTTACTAGTGAAGACTATCGCACGTTTT
TACAGCAGCCTTCTGGAAATATGGATGACAGTGGCTTTTTCTCTATTCAAGTTATAAGCAATGCCTTGAAAGTTTGGGGT
TTGGAACTAATCCTGTTCAACAGTCCAGAGTATCAGCGACTCAGGATTGATCCTATAAATGAAAAATCATTTATTTGCAA
TTATAAAGAACACTGGTTTACAGTTAGAAAATTAGGAAAACAGCAGTGGTTTAACTTGAATTCTCTCTTGACGGGTCCAG
AATTAATATCAGATACATACCTTGCACTTTTCTTGGCTCAATTACAACAGGAAGGTTATTCTATATTTGTTGTTAAGGGT
GATCTGCCAGATTGTGAAGCTGACCAACTTCTCCAGATGATCAGGGTCCAACAGATGCATCGACCAAAACTCATTGGAGA
AGAGTTAGCACAACTGAAAGAGCAGAGAGTCCTTAAAACAGACCTGGAACAAGTCTTAGAAGGAAATGATGGGTCAGGAA
TGTTAGATGAAGATGAAGAGGATTTGCAGAGGGCACTGGCACTAAGTCGGCAGCAGATTGACATGGAAGATGAAGAAGCA
GATCTTCGCAGGGCTATTCAGCTCAGTATGCAAGGGGGTTCCAGAAATATATCTCAAGATGTTGCACAGACATCAGGCAC
AGATCTTACATTTGAAGAGCTGCGAAGGAGAAGAGAAGCCTACTTTGAAAATTTTCATAAATTAAAAGTAGAACAACTCC
ATGAACATCAGATAACAAGAATACAAAGTGAAAAGCAGCAGCGGGCAGATCCATCAGGACAGGCTTCACAGCCACATGAA
AGGCCAACCACGAGTTCAGGAGCACTTGGGAATGATCTAGGTGATTCTGTGAGTGAAGAAGACATGCTTCAGGCAGCTGT
GACCATGTCTTTAGAAACTGTTACAAATAATTTGAAAACAGAAGGGAAAAAATAG
CAAGAAGGATCACTTTGTGCTCAACACTGCCTGAATAATCTGTTGCAAGGAGAATACTTTAGCCCTGTGGAGTTATCCTC
AATTGCCCACCAGCTGGATGAGGAAGAAAGGATGAGAATGGCAGAAGGAGGCGTTACTAGTGAAGACTATCGCACGTTTT
TACAGCAGCCTTCTGGAAATATGGATGACAGTGGCTTTTTCTCTATTCAAGTTATAAGCAATGCCTTGAAAGTTTGGGGT
TTGGAACTAATCCTGTTCAACAGTCCAGAGTATCAGCGACTCAGGATTGATCCTATAAATGAAAAATCATTTATTTGCAA
TTATAAAGAACACTGGTTTACAGTTAGAAAATTAGGAAAACAGCAGTGGTTTAACTTGAATTCTCTCTTGACGGGTCCAG
AATTAATATCAGATACATACCTTGCACTTTTCTTGGCTCAATTACAACAGGAAGGTTATTCTATATTTGTTGTTAAGGGT
GATCTGCCAGATTGTGAAGCTGACCAACTTCTCCAGATGATCAGGGTCCAACAGATGCATCGACCAAAACTCATTGGAGA
AGAGTTAGCACAACTGAAAGAGCAGAGAGTCCTTAAAACAGACCTGGAACAAGTCTTAGAAGGAAATGATGGGTCAGGAA
TGTTAGATGAAGATGAAGAGGATTTGCAGAGGGCACTGGCACTAAGTCGGCAGCAGATTGACATGGAAGATGAAGAAGCA
GATCTTCGCAGGGCTATTCAGCTCAGTATGCAAGGGGGTTCCAGAAATATATCTCAAGATGTTGCACAGACATCAGGCAC
AGATCTTACATTTGAAGAGCTGCGAAGGAGAAGAGAAGCCTACTTTGAAAATTTTCATAAATTAAAAGTAGAACAACTCC
ATGAACATCAGATAACAAGAATACAAAGTGAAAAGCAGCAGCGGGCAGATCCATCAGGACAGGCTTCACAGCCACATGAA
AGGCCAACCACGAGTTCAGGAGCACTTGGGAATGATCTAGGTGATTCTGTGAGTGAAGAAGACATGCTTCAGGCAGCTGT
GACCATGTCTTTAGAAACTGTTACAAATAATTTGAAAACAGAAGGGAAAAAATAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 10 .88 RPM |
| SRP017611_kidney | 9 .42 RPM |
| SRP017611_brain | 9 .49 RPM |
| SRP040447_lung | 9 .46 RPM |
| SRP040447_skeletal_muscle | 2 .10 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000005786 | ortholog_one2many | 2 retrogenes | |
| Choloepus hoffmanni | ENSCHOG00000005302 | ortholog_one2many | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000018025 | possible_ortholog | 2 retrogenes | |
| Homo sapiens | ENSG00000066427 | ortholog_one2many | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000020751 | ortholog_one2many | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000002006 | ortholog_one2many | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000017126 | ortholog_one2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000006075 | ortholog_one2many | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000015316 | possible_ortholog | 2 retrogenes | |
| Tupaia belangeri | ENSTBEG00000008099 | ortholog_one2many | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cpor_1460 | 95.41 | 77.75 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCPOG00000010887 retrocopies