Parental gene: | ATXN3, ENSMMUG00000020751 |
| Aliases: | None |
| Description: | ataxin 3 [Source:HGNC Symbol;Acc:7106] |
| Organism: | Rhesus macaque (Macaca mulatta) |
| Coordinates: | 1099553000000:10050..45764(+) |
>ENSMMUG00000020751
CAAGAAGGCTCACTCTGTGCTCAACATTGCCTGAATAATTTATTGCAAGGAGAATATTTTAGCCCTGTGGAATTATCCTC
AATTGCACATCAGCTGGATGAGGAGGAGAGGATGAGAATGGCAGAAGGAGGAGTTACTAGTGAAGATTATCGCACGTTTT
TACAGCAGCCTTCTGGAAATATGGATGACAGTGGTTTTTTCTCTATTCAGGTTATAAGCAATGCCTTGAAAGTTTGGGGT
TTAGAACTAATCCTGTTCAACAGTCCAGAGTATCAGAGGCTCAGGATCGATCCTATAAATGAAAGATCATTTATATGCAA
TTATAAGGAACACTGGTTTACAGTTAGAAAATTAGGAAAACAGTGGTTTAACTTGAATTCTCTCTTGACGGGTCCAGAGT
TAATATCAGATACATACCTTGCACTTTTCTTGGCTCAATTACAACAGGAAGGTTATTCTATATTTGTTGTTAAGGGTGAC
CTGCCAGATTGCGAAGCTGACCAGCTCCTGCAGATGATCAGGGTCCAACAGATGCACCGACCAAAACTTATTGGAGAAGA
ATTAGCACAACTGAAAGAGCAAAGAGTCCATAAAACAGACCTGGAACGAGTGTTAGAAGCAAATGATGGCTCAGGAATGT
TAGATGAAGATGAGGAGGATTTGCAGAGGGCTCTGGCACTAAGTCGCCAAGAAATTGACATGGAAGATGAGGAAGCAGAT
CTCCGCAGGGCTATTCAGCTAAGTATGCAAGGTAGTTCCAGAAATATATCTCAAGATATTCCACAGACATCAGGTACAAA
TCTTACTTCAGAAGAGCTTCGGAAGAGACGAGAAGCCTACTTTGAAAATAATCTATATCAGACTAACTGCTCTTGCATTC
TTTTAATACAGCAGCAACAGCAGAAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCACATCCATGT
GAAAGGCCAACCACCAGTTCAGGAGCACTTGGGAGTGATTTAGGTGATGCTATGGGTGAAGAAGACATGCTTCAGGCAGC
TGTGACCATGTCTTTAGAAACTGTCAGAAATGATTTGAAAACAGAAGGAAAAAAATAA
CAAGAAGGCTCACTCTGTGCTCAACATTGCCTGAATAATTTATTGCAAGGAGAATATTTTAGCCCTGTGGAATTATCCTC
AATTGCACATCAGCTGGATGAGGAGGAGAGGATGAGAATGGCAGAAGGAGGAGTTACTAGTGAAGATTATCGCACGTTTT
TACAGCAGCCTTCTGGAAATATGGATGACAGTGGTTTTTTCTCTATTCAGGTTATAAGCAATGCCTTGAAAGTTTGGGGT
TTAGAACTAATCCTGTTCAACAGTCCAGAGTATCAGAGGCTCAGGATCGATCCTATAAATGAAAGATCATTTATATGCAA
TTATAAGGAACACTGGTTTACAGTTAGAAAATTAGGAAAACAGTGGTTTAACTTGAATTCTCTCTTGACGGGTCCAGAGT
TAATATCAGATACATACCTTGCACTTTTCTTGGCTCAATTACAACAGGAAGGTTATTCTATATTTGTTGTTAAGGGTGAC
CTGCCAGATTGCGAAGCTGACCAGCTCCTGCAGATGATCAGGGTCCAACAGATGCACCGACCAAAACTTATTGGAGAAGA
ATTAGCACAACTGAAAGAGCAAAGAGTCCATAAAACAGACCTGGAACGAGTGTTAGAAGCAAATGATGGCTCAGGAATGT
TAGATGAAGATGAGGAGGATTTGCAGAGGGCTCTGGCACTAAGTCGCCAAGAAATTGACATGGAAGATGAGGAAGCAGAT
CTCCGCAGGGCTATTCAGCTAAGTATGCAAGGTAGTTCCAGAAATATATCTCAAGATATTCCACAGACATCAGGTACAAA
TCTTACTTCAGAAGAGCTTCGGAAGAGACGAGAAGCCTACTTTGAAAATAATCTATATCAGACTAACTGCTCTTGCATTC
TTTTAATACAGCAGCAACAGCAGAAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCACATCCATGT
GAAAGGCCAACCACCAGTTCAGGAGCACTTGGGAGTGATTTAGGTGATGCTATGGGTGAAGAAGACATGCTTCAGGCAGC
TGTGACCATGTCTTTAGAAACTGTCAGAAATGATTTGAAAACAGAAGGAAAAAAATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 8 .49 RPM |
| SRP007412_brain | 13 .45 RPM |
| SRP007412_cerebellum | 15 .18 RPM |
| SRP007412_heart | 6 .42 RPM |
| SRP007412_kidney | 12 .32 RPM |
| SRP007412_liver | 3 .44 RPM |
| SRP007412_testis | 10 .10 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000005786 | ortholog_one2one | 2 retrogenes | |
| Choloepus hoffmanni | ENSCHOG00000005302 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000018025 | possible_ortholog | 2 retrogenes | |
| Cavia porcellus | ENSCPOG00000010887 | ortholog_one2many | 1 retrogene | |
| Homo sapiens | ENSG00000066427 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000002006 | ortholog_one2many | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000017126 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000006075 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000008099 | ortholog_one2one | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmul_298 | 75.62 | 77.53 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMMUG00000020751 retrocopies