Parental gene: | TGIF2-C20orf24, ENSCPOG00000011435 |
| Aliases: | None |
| Description: | TGIF2-C20orf24 readthrough [Source:HGNC Symbol;Acc:44664] |
| Organism: | Guinea Pig (Cavia porcellus) |
| Coordinates: | scaffold_45:3226818..3237721(+) |
>ENSCPOG00000011435
ATGAGCGGCGGGCGGCGGAAGGAGGAGCCGTCTCAGCCGCAGCTGGCCAACGGGGCCCCCAAAGTCTCTGTTTGGAGCAA
GGTGCTGCGGAGCGACGCGGCCTGGGAAGACAAGGATGAATTTTTAGATGTGATCTACTGGTTCCGACAGATCATCGCTG
TGGTCCTGGGTGTCATTTGGGGAGTTTTGCCATTGCGAGGTTTCTTGGGAATAGCAGGATTCTGCCTGATCAATGCAGGA
GTCCTGTACCTCTACTTCAGCAATTATCTACAGATTGATGAGGAAGAATATGGTGGCACATGGGAACTCACAAAAGAAGG
ATTTATGACATCTTTTGCTTTGTTCATGGTAATCTGGATCATCTTTTACACTGCCATCCACTATGAC
ATGAGCGGCGGGCGGCGGAAGGAGGAGCCGTCTCAGCCGCAGCTGGCCAACGGGGCCCCCAAAGTCTCTGTTTGGAGCAA
GGTGCTGCGGAGCGACGCGGCCTGGGAAGACAAGGATGAATTTTTAGATGTGATCTACTGGTTCCGACAGATCATCGCTG
TGGTCCTGGGTGTCATTTGGGGAGTTTTGCCATTGCGAGGTTTCTTGGGAATAGCAGGATTCTGCCTGATCAATGCAGGA
GTCCTGTACCTCTACTTCAGCAATTATCTACAGATTGATGAGGAAGAATATGGTGGCACATGGGAACTCACAAAAGAAGG
ATTTATGACATCTTTTGCTTTGTTCATGGTAATCTGGATCATCTTTTACACTGCCATCCACTATGAC
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 51 .41 RPM |
| SRP017611_kidney | 35 .49 RPM |
| SRP017611_brain | 13 .52 RPM |
| SRP040447_lung | 24 .39 RPM |
| SRP040447_skeletal_muscle | 13 .64 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000021805 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000017777 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000000891 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000020317 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cpor_1090 | 83.54 | 61.24 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cpor_1382 | 76.69 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCPOG00000011435 retrocopies