Parental gene: | NAA50, ENSCPOG00000014169 |
| Aliases: | None |
| Description: | None |
| Organism: | Guinea Pig (Cavia porcellus) |
| Coordinates: | scaffold_35:15209254..15212535(-) |
>ENSCPOG00000014169
TGTTCCAGTAGCCGGATCGAACTCGGAGATGTAACACCACACAATATCAAACAGTTGAAGAGGTTAAACCAGGTCATCTT
TCCAGTCAGCTATAATGACAAGTTCTACAAGGATGTGCTGGAGGTTGGCGAGCTAGCAAAACTTGCCTATTTCAATGATA
TTGCTGTAGGTGCAGTATGCTGCAGGGTGGATCATTCACAGAATCAGAAGAGACTTTACATCATGACCCTAGGATGTCTG
GCACCTTACCGAAGGCTAGGAATAGGAACTAAAATGTTAAATCATGTCTTAAACATCTGTGAGAAAGATGGCACTTTCGA
CAACATCTATCTGCATGTCCAGATCAGCAATGAGTCCGCAATCGACTTCTACAGGAAGTTTGGCTTTGAGATTATTGAGA
CAAAGAAGAACTACTATAAGAGAATAGAACCTGCTGATGCGCATGTGCTTCAGAAAAACCTCAAAGTCCCTTCTGGTCAG
AATGCAGATGCACAAAAGACAGACAACTGA
TGTTCCAGTAGCCGGATCGAACTCGGAGATGTAACACCACACAATATCAAACAGTTGAAGAGGTTAAACCAGGTCATCTT
TCCAGTCAGCTATAATGACAAGTTCTACAAGGATGTGCTGGAGGTTGGCGAGCTAGCAAAACTTGCCTATTTCAATGATA
TTGCTGTAGGTGCAGTATGCTGCAGGGTGGATCATTCACAGAATCAGAAGAGACTTTACATCATGACCCTAGGATGTCTG
GCACCTTACCGAAGGCTAGGAATAGGAACTAAAATGTTAAATCATGTCTTAAACATCTGTGAGAAAGATGGCACTTTCGA
CAACATCTATCTGCATGTCCAGATCAGCAATGAGTCCGCAATCGACTTCTACAGGAAGTTTGGCTTTGAGATTATTGAGA
CAAAGAAGAACTACTATAAGAGAATAGAACCTGCTGATGCGCATGTGCTTCAGAAAAACCTCAAAGTCCCTTCTGGTCAG
AATGCAGATGCACAAAAGACAGACAACTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 29 .73 RPM |
| SRP017611_kidney | 23 .87 RPM |
| SRP017611_brain | 17 .02 RPM |
| SRP040447_lung | 26 .71 RPM |
| SRP040447_skeletal_muscle | 82 .56 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Gorilla gorilla | ENSGGOG00000006589 | ortholog_one2one | 2 retrogenes | |
| Loxodonta africana | ENSLAFG00000004023 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000006467 | ortholog_one2one | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000011197 | ortholog_one2one | 1 retrogene | |
| Procavia capensis | ENSPCAG00000009780 | ortholog_one2one | 2 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000009438 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cpor_217 | 73.24 | 83.43 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cpor_480 | 88.00 | 59.17 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_cpor_1027 | 75.78 | 74.56 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_cpor_1028 | 81.10 | 73.96 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_cpor_1199 | 69.05 | 72.78 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_cpor_1200 | 66.93 | 72.78 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCPOG00000014169 retrocopies