Parental gene:

SKA1, ENSDNOG00000000190

Aliases:None
Description:spindle and kinetochore associated complex subunit 1 [Source:HGNC Symbol;Acc:28109]
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:GeneScaffold_4499:8017..36489(+)


>ENSDNOG00000000190
ATGACCTCTTCAGATCTGGAACAATTATGCTCTCACATTAATGAAAAAATTGGCAATATTAAAAAAACTCTGTCATTAAG
AAACTGTGGCCAAGAACCTATGTTGAAGACTATGTTAAATAAAATAGGAGATGAAGTCATCAGAGTAAATGAACTTCTAA
ATAAATTGGAATTAGAAATTCAGTATCAAGAACAAACCAACAATTCACTCAAGNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTTAAGGA
ATCAGAACTTAATCCTGAAGAACTAGTCAAAGTTGAGGAGACTGCACCCACAAAGAAGCTCCTAAAAGAACAAAGAAATA
TTAAAGAACCATTTATAACTTCTGATGAGTTCAATGGTGNNNNNNNATACATGAAGTCCCGCTTAACCTATTGTCAAATT
AATGATGTTATTAAAGAAATCAACAAGGCAGTAATAAGTAAATATAAGATCCTACATCAACCAAAAAAGTCTATGAATTC
TGTGGCCAGAAATCTCTACCACAGATTTATTGATGAAGAAACAAAGGATACTAAAGGTCATTATTTTATAGTGGAAGCTG
ACATAAAGGAGTTCACATCATTGAAAGTTGACAAGAAGTTTCACGGGATGCTGAATATTTTACGACACTGCCGGAGAATA
TCAGAGATCCGAGGGCAGGGGCTCACCCGTTATGCCATAAACTGA

Library Parental gene expression (RPM)
SRP012922_ascending_colon 2 .72 RPM
SRP012922_cerebellum 0 .14 RPM
SRP012922_heart 0 .00 RPM
SRP012922_kidney 0 .00 RPM
SRP012922_liver 0 .15 RPM
SRP012922_lung 0 .31 RPM
SRP012922_quadricep_muscle 0 .00 RPM
SRP012922_spleen 7 .44 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000008555 ortholog_one2one 2 retrogenes
retro_cjac_1103, retro_cjac_875,
Loxodonta africana ENSLAFG00000005238 ortholog_one2one 1 retrogene
retro_lafr_849,
Myotis lucifugus ENSMLUG00000013388 ortholog_one2one 1 retrogene
retro_mluc_2127,
Sus scrofa ENSSSCG00000004518 ortholog_one2one 1 retrogene
retro_sscr_360,
Tursiops truncatus ENSTTRG00000015539 ortholog_one2one 1 retrogene
retro_ttru_1083,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_1081 74.19 59.06
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Download FASTA sequences of all ENSDNOG00000000190 retrocopies