Parental gene: | DESI2, ENSDNOG00000003484 |
| Aliases: | None |
| Description: | desumoylating isopeptidase 2 [Source:HGNC Symbol;Acc:24264] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_2427:63515..119306(+) |
>ENSDNOG00000003484
GTAAACCTTGACAAAGGTAGCACTTTTCAGTGTTACTACTGGATGAACGAATACACCTCTTCCATTGGAATTGGAGTTTT
TCATTCAGGAATTGAAGTATATGGCAGAGAATTTGCTTATGGTGGCCATCCTTACCCCTTTTCTGGAATATTTGAAATTT
CCCCAGGAAATGCTTCTGAACTAGGAGAAACATTTAAATTTAAAGAAGCTGTTGTTTTAGGGAGGACTGATTTCCTAGAA
GATGACATAGAAAAAATTGTAGAAGAACTGGGAAAAGAATACAAAGGCAATGCCTATCATTTGATGCATAAAAACTGCAA
TCACTTTTCTTCAGCTTTATCAGAGATTCTTTGTGGGAAGGAGATTCCTCGCTGGATCAATCGACTAGCCTACTTCAGCT
CCTGTATACCCTTCCTGCAGAGTTGCCTCCCGAAAGAGTGGCTCACTCCGGGAGCTCTCCAGTCCAGTTTCAACCAGGAG
ATCCAGGAAGAGCTGGAGGAAGCAGGAGAAGCCGCCGCTTCAGATGCTGCGACGAGCACGGCAGACTCCAGGCCCGGGCG
CCACACCAAGTTATAA
GTAAACCTTGACAAAGGTAGCACTTTTCAGTGTTACTACTGGATGAACGAATACACCTCTTCCATTGGAATTGGAGTTTT
TCATTCAGGAATTGAAGTATATGGCAGAGAATTTGCTTATGGTGGCCATCCTTACCCCTTTTCTGGAATATTTGAAATTT
CCCCAGGAAATGCTTCTGAACTAGGAGAAACATTTAAATTTAAAGAAGCTGTTGTTTTAGGGAGGACTGATTTCCTAGAA
GATGACATAGAAAAAATTGTAGAAGAACTGGGAAAAGAATACAAAGGCAATGCCTATCATTTGATGCATAAAAACTGCAA
TCACTTTTCTTCAGCTTTATCAGAGATTCTTTGTGGGAAGGAGATTCCTCGCTGGATCAATCGACTAGCCTACTTCAGCT
CCTGTATACCCTTCCTGCAGAGTTGCCTCCCGAAAGAGTGGCTCACTCCGGGAGCTCTCCAGTCCAGTTTCAACCAGGAG
ATCCAGGAAGAGCTGGAGGAAGCAGGAGAAGCCGCCGCTTCAGATGCTGCGACGAGCACGGCAGACTCCAGGCCCGGGCG
CCACACCAAGTTATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 2 .92 RPM |
| SRP012922_cerebellum | 6 .46 RPM |
| SRP012922_heart | 3 .02 RPM |
| SRP012922_kidney | 1 .64 RPM |
| SRP012922_liver | 4 .49 RPM |
| SRP012922_lung | 2 .75 RPM |
| SRP012922_quadricep_muscle | 4 .67 RPM |
| SRP012922_spleen | 4 .12 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000000016 | ortholog_one2one | 1 retrogene | |
| Erinaceus europaeus | ENSEEUG00000009507 | ortholog_one2one | 2 retrogenes | |
| Homo sapiens | ENSG00000121644 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000009797 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000004019 | ortholog_one2one | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000015368 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000000055 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000002180 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000010876 | ortholog_one2one | 1 retrogene | |
| Drosophila melanogaster | FBgn0033551 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_539 | 73.48 | 93.19 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_dnov_1042 | 81.77 | 93.72 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_dnov_2533 | 71.18 | 88.48 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSDNOG00000003484 retrocopies