Parental gene:

DESI2, ENSPPYG00000000055

Aliases:DESI2, DeSI-2, FAM152A, PPPDE1
Description:Desumoylating isopeptidase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q5R456]
Organism:Orangutan (Pongo abelii)
Coordinates:1:4437580..4464837(-)


>ENSPPYG00000000055
TATTGGATGAACGAATATACCTCATCCATTGGAATTGGAGTTTTTCATTCAGGAATTGAAGTCTATGGCAGAGAATTTGC
TTATGGTGGCCATCCTTACCCCTTTTCTGGAATATTTGAAATTTCCCCAGGAAATGCTTCTGAACTAGGAGAAACATTTA
AATTTAAAGAAGCTGTTGTTTTAGGGAGCACGGACTTCCTAGAAGATGATATAGAAAAAATTGTGGAAGAACTGGGAAAA
GAATACAAAGGCAATGCTTATCATTTAATGCATAAAAACTGCAATCATTTTTCTTCAGCTTTATCAGAGATTCTTTGTGG
GAAAGAGATTCCTCGCTGGATCAATCGACTTGCCTACTTCAGCTCCTGTATACCCTTTCTACAGAGTTGCCTCCCGAAGG
AGTGGCTCACGCCTGCAGCTCTGCAGTCTAGTGTCAGCCAAGAGCTCCAGGATGAACTGGAGGAAGCAGAGGATGCTGCC
GCATCCGCTTCCGCGGCAAGCACGGCAGCAGGCTCCAGACCTGGGCGCCACACTAAACTATAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 6 .25 RPM
SRP007412_cerebellum 25 .17 RPM
SRP007412_heart 11 .44 RPM
SRP007412_kidney 7 .42 RPM
SRP007412_liver 6 .82 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000000016 ortholog_one2one 1 retrogene
retro_chof_2439,
Dasypus novemcinctus ENSDNOG00000003484 ortholog_one2one 3 retrogenes
retro_dnov_1042, retro_dnov_2533, retro_dnov_539,
Erinaceus europaeus ENSEEUG00000009507 ortholog_one2one 2 retrogenes
retro_eeur_394, retro_eeur_470,
Homo sapiens ENSG00000121644 ortholog_one2one 1 retrogene
retro_hsap_2071,
Gorilla gorilla ENSGGOG00000009797 ortholog_one2one 1 retrogene
retro_ggor_1493,
Nomascus leucogenys ENSNLEG00000004019 ortholog_one2one 1 retrogene
retro_nleu_2734,
Ochotona princeps ENSOPRG00000015368 ortholog_one2one 2 retrogenes
retro_opri_1007, retro_opri_963,
Pan troglodytes ENSPTRG00000002180 ortholog_one2one 1 retrogene
retro_ptro_1384,
Sus scrofa ENSSSCG00000010876 ortholog_one2one 1 retrogene
retro_sscr_388,
Drosophila melanogaster FBgn0033551 ortholog_one2many 1 retrogene
retro_dmel_30,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_1685 94.23 57.78
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Download FASTA sequences of all ENSPPYG00000000055 retrocopies