Parental gene:

AKTIP, ENSDNOG00000004906

Aliases:None
Description:AKT interacting protein [Source:HGNC Symbol;Acc:16710]
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:GeneScaffold_1343:243721..249848(-)


>ENSDNOG00000004906
TGGAGCATGTCTACAAGCTCTGCACGCAAACGATCTGATGGTGAAGAGAAGATATTAACAGGGGATGTGAAAACCAGTCC
TCCACGCACTGCTCCAAAGAAACAGCTGCCTTCTATTCCCAAAAATGCCTTGCCCATAACTAAGCCTACATCTCCTGCCC
CAGCAGCACAATCAACAAATGGCACACATGCTTCTTATGGACCCTTCTACCTGGAATATTCTCTTCTTGCAGAATTTACC
TTGGTTGTGAAGCAGAAGTTACCTGGTGTCTATGTGCAGCCATCTTATCGCTCTGCATTAATGTGGTTTGGAGTAATATT
CATCCGGCACGGACTTTATCAAGATGGTGTATTTAAGTTTACGGTTTATATCCCTGATAACTACCCAGATGGCGACTGTC
CTCGCTTGGTGTTTGATATTCCCGTCTTTCATCCGCTAGTTGATCCCACCTCAGGTGAACTGGATGTGAAGAGAGCATTT
GCAAAATGGAGGCGGAACCATAATCATATTTGGCAAGTATTAATGTATGCAAGGAGAGTTTTCTACAAGATTGATACAGC
AAGCCCCCTAAACCCAGAGGCTGCAGTACTGTATGAAAAAGATGTTCAGCTCTTTAAAAGTAAAGTGGTTGACAGTGTTA
AGGTGTGCACTGCTCGTTTGTTTGACCAACCTAAAATAGAGGACCCCTATGCAATTAGCTTTTCTCCATGGAATCCTTCT
GTACATGATGAAGCCAGAGAGAAGATGCTTACTCAGAAAAAGCCTGAAGAACAGCACAATAAAAGTGTTCATGTTGCTGG
CCTGTCATGGGTAAAGCCTGGCTCAGTACAACCTTTCAGTAAAGAAGAGAAAACAGTAGCAACTTAA

Library Parental gene expression (RPM)
SRP012922_ascending_colon 33 .84 RPM
SRP012922_cerebellum 49 .63 RPM
SRP012922_heart 27 .84 RPM
SRP012922_kidney 47 .37 RPM
SRP012922_liver 16 .56 RPM
SRP012922_lung 44 .44 RPM
SRP012922_quadricep_muscle 56 .77 RPM
SRP012922_spleen 26 .55 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000016345 ortholog_one2one 1 retrogene
retro_amel_392,
Canis familiaris ENSCAFG00000009500 ortholog_one2one 1 retrogene
retro_cfam_1826,
Choloepus hoffmanni ENSCHOG00000013690 ortholog_one2one 2 retrogenes
retro_chof_2533, retro_chof_629,
Callithrix jacchus ENSCJAG00000001498 ortholog_one2one 1 retrogene
retro_cjac_2895,
Cavia porcellus ENSCPOG00000006523 ortholog_one2one 1 retrogene
retro_cpor_622,
Equus caballus ENSECAG00000020381 ortholog_one2one 1 retrogene
retro_ecab_504,
Homo sapiens ENSG00000166971 ortholog_one2one 2 retrogenes
retro_hsap_1458, retro_hsap_3152,
Gorilla gorilla ENSGGOG00000014821 ortholog_one2many 1 retrogene
retro_ggor_1122,
Microcebus murinus ENSMICG00000010810 ortholog_one2many 3 retrogenes
retro_mmur_124, retro_mmur_333, retro_mmur_985,
Microcebus murinus ENSMICG00000016793 ortholog_one2many 1 retrogene
retro_mmur_1191,
Monodelphis domestica ENSMODG00000025788 ortholog_one2one 1 retrogene
retro_mdom_1881,
Nomascus leucogenys ENSNLEG00000001106 ortholog_one2one 1 retrogene
retro_nleu_2660,
Otolemur garnettii ENSOGAG00000014495 ortholog_one2one 1 retrogene
retro_ogar_365,
Oryzias latipes ENSORLG00000013747 ortholog_one2one 1 retrogene
retro_olat_30,
Pongo abelii ENSPPYG00000007351 ortholog_one2one 2 retrogenes
retro_pabe_1204, retro_pabe_1205,
Pan troglodytes ENSPTRG00000008116 ortholog_one2one 1 retrogene
retro_ptro_2282,
Rattus norvegicus ENSRNOG00000011956 ortholog_one2one 1 retrogene
retro_rnor_1611,
Tupaia belangeri ENSTBEG00000017105 ortholog_one2one 5 retrogenes
retro_tbel_1063, retro_tbel_2864, retro_tbel_3350, retro_tbel_4130, retro_tbel_853,
Tursiops truncatus ENSTTRG00000012705 ortholog_one2one 1 retrogene
retro_ttru_348,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_756 72.02 56.25
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2. retro_dnov_1376 72.02 56.25
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3. retro_dnov_1776 90.38 100.00
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4. retro_dnov_2080 69.89 58.33
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Download FASTA sequences of all ENSDNOG00000004906 retrocopies