Parental gene:

MFSD1, ENSDNOG00000005048

Aliases:None
Description:major facilitator superfamily domain containing 1 [Source:HGNC Symbol;Acc:25874]
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:GeneScaffold_6119:226633..244094(+)


>ENSDNOG00000005048
ATGGAAGAGGAGGAAGAGGAAGCGCGGGCGTTGCTGGCAGGCAGCCCCGAGGAGGCCCGCAGAGGTGTCCTCGCTGCCCC
CGAGGCGCTGCCGGCCCTCTGTGACCCCAGTCGCCTGGCACACCGACTTTTGGTGCTGTTGCTGATGTGCCTTCTTGGCT
TCGGTAGCTATTTTTGTTATGATAATCCTGCTGCCCTTCAGACTCAGGTTAAACGGGACATGCAGGTGAATACCACGAAA
TTCATGCTGCTGTATGCCTGGTATTCTTGGCCCAATGTAGTTTTGTGTTTCTTTGGTGGCTTTTTGATAGATCGAGTATT
TGGAATACGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATTGGTGGGGAGTCCTTAGCAGTGGCCCAGAATACATAT
GCTGTGAGTTGGTTTAAAGGCAAAGAATTAAACCTGGTGTTTGGACTTCAACTTAGCATGGCTAGAATTGGAAGTACAGT
AAATATGAACCTCATGGGATGGCTGTATTCTAAGATTGAAGCTTCGCTGGGTTCTGCGGGTCACACAACCCTTGGTGTCA
CACTTATGATCGGGGGTATAACATGTATTCTTTCACTAATCTCTGCCTTGGCCCTTGCTTACTTGGATCAGAGAGCAGAA
AGAATTCTTCATAAAGAACAAGGAAAAACAGGTGAAGTTATTAAGCTGACTGATGTGAAGGACTTCTCCTTATCCCTGTG
GCTCATATTTATCATCTGTGTCTGCTATTATGTAGTGGTGTTCCCTTTTATTGGGCTGGGAAAAGTTTTCTTTACAGAGA
AATTTGGATTTTCCTCCCAGGCAGCAAGTGCGATTAACAGTGTTGTATATGTCATATCAGCTCCCATGTCCCCAATATTT
GGGATCCTGGTGGATAAAACAGGAAGAAACATCATCTGGGTTCTGTGTGCAGTGGCGACCACTCTGGCTTCTCACATGAT
GTTGGCCTTTACGCTGTGGAACCCTTGGATTGCTATGTGCCTCCTGAGACTCTCCTATTCATTGCTTGCCTGCGCACTGT
GGCCAATGATGGCCTTTGTGGTCCCTGAACATCAGCTGAGAACTGCATATGGCTTNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNTGTCACTTTTAGCTGTGGTGTTGCTCTATTTGGTGAATCGTGCCCAAGGTGGTAACCTAAACTATTCTGCCA
GGCAAAGGGAAGAAATAAAACTTTTTTCTCATACT

Library Parental gene expression (RPM)
SRP012922_ascending_colon 19 .45 RPM
SRP012922_cerebellum 10 .04 RPM
SRP012922_heart 11 .60 RPM
SRP012922_kidney 28 .47 RPM
SRP012922_liver 11 .15 RPM
SRP012922_lung 20 .92 RPM
SRP012922_quadricep_muscle 7 .27 RPM
SRP012922_spleen 30 .45 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000009263 ortholog_one2one 1 retrogene
retro_btau_1323,
Macaca mulatta ENSMMUG00000023510 ortholog_one2one 1 retrogene
retro_mmul_1210,
Oryctolagus cuniculus ENSOCUG00000001272 ortholog_one2one 1 retrogene
retro_ocun_1528,
Pongo abelii ENSPPYG00000014247 ortholog_one2many 1 retrogene
retro_pabe_1427,
Tupaia belangeri ENSTBEG00000013974 ortholog_one2one 1 retrogene
retro_tbel_1396,
Tursiops truncatus ENSTTRG00000002207 ortholog_one2one 2 retrogenes
retro_ttru_1119, retro_ttru_1271,
Drosophila melanogaster FBgn0031636 ortholog_one2many 1 retrogene
retro_dmel_45,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_1121 94.69 52.47
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Download FASTA sequences of all ENSDNOG00000005048 retrocopies