Parental gene:

MFSD1, ENSMMUG00000023510

Aliases:None
Description:None
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:2:128878972..128904035(-)


>ENSMMUG00000023510
ATGGAGGAGGAAGATGAGGAAGCGCGGGCGCTCTTGGCAGGCGGCTCTGACGAGGCTGACAGGGGTGCCCCCGCCGCCCC
CGGGGCCCTGCCGGCCCTCTGTGACCCCAGTCGCCTGGCGCACCGGCTTTTGGTGCTGTTACTGATGTGCTTCCTTGGCT
TCGGCAGCTATTTTTGCTATGATAATCCTGCTGCCCTTCAGACTCAAGTTAAACGAGATATGCAAGTGAATACCACGAAA
TTCATGCTGCTGTATGCCTGGTATTCTTGGCCCAATGTAGTTTTGTGTTTCTTTGGTGGCTTTTTGATAGACCGAGTATT
TGGAATACGATGGGGCACGATCATTTTTAGCTGCTTTGTTTGCATTGGACAGGTTGTTTTTGCTCTGGGTGGAATATTTA
ATGTGTTTTGGCTGATGGAATTTGGAAGATTTGTATTTGGGATTGGTGGAGAGTCCTTAGCAGTTGCCCAGAATACATAT
GCTGTGAGCTGGTTTAAAGGCAAAGAATTAAACCTGGTGTTTGGACTTCAACTTAGCATGGCTAGAATTGGAAGTACCGT
AAACATGAACCTCATGGGATGGCTGTATTCTAAGATCGAAGCTTTGTTAGGTTCTGCTGGTCACACAACCCTTGGGATCA
CACTTATGATTGGGGGTATAACATGTATTCTTTCACTAATCTGTGCCTTGGCTCTTGCCTACTTGGATCAGAGAGCAGAG
AGAATCCTTCACAAAGAACAAGGAAAAACAGGTGAAGTTATTAAATTAACTGATGTAAAGGACTTCTCCTTACCCCTGTG
GCTCATATTTATCATCTGTGTCTGCTATTATGTTGCTGTGTTCCCTTTTATTGGACTTGGGAAAGTTTTCTTTACAGAGA
AATTTGGATTTTCTTCCCAGGCAGCAAGTGCAATTAACAGTGTTGTATATGTCATATCAGCTCCCATGTCCCCAGTATTT
GGGCTCCTGGTGGATAAAACAGGGAAGAACATCCTCTGGGTTCTTTGCGCAGTAGCAGCCACTCTTGTGTCCCACATGAT
GCTGGCCTTTACGATGTGGAATCCTTGGATTGCTATGTGTCTTCTGGGACTCTCCTATTCATTGCTTGCCTGTGCATTGT
GGCCAATGGTGGCATTTGTAGTTCCTGAACATCAGCTGGGAACTGCATATGGCTTCATGCAGTCCATTCAGAATCTTGGG
TTGGCCATCATTTCCATCATTGCTGGTATGATACTGGATTCTCGGGGGTATTTGTTTTTAGAAGTGTTCTTCATTGCCTG
TGTTTCTTTGTCACTTTTATCTGTGGTCTTACTCTATTTGGTGAATCGTGCCCAGGGTGGGAACCTCAATTATTCTGCAA
GACAAAGGGAAGAAATAAAATTTTCCCATACTGAATAA

Library Parental gene expression (RPM)
SRP007412_brain 42 .69 RPM
SRP007412_brain_prefrontal_cortex 28 .48 RPM
SRP007412_cerebellum 24 .47 RPM
SRP007412_heart 27 .91 RPM
SRP007412_kidney 57 .04 RPM
SRP007412_liver 19 .16 RPM
SRP007412_testis 7 .09 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000009263 ortholog_one2one 1 retrogene
retro_btau_1323,
Dasypus novemcinctus ENSDNOG00000005048 ortholog_one2one 1 retrogene
retro_dnov_1121,
Oryctolagus cuniculus ENSOCUG00000001272 ortholog_one2one 1 retrogene
retro_ocun_1528,
Pongo abelii ENSPPYG00000014247 ortholog_one2one 1 retrogene
retro_pabe_1427,
Tupaia belangeri ENSTBEG00000013974 ortholog_one2one 1 retrogene
retro_tbel_1396,
Tursiops truncatus ENSTTRG00000002207 ortholog_one2one 2 retrogenes
retro_ttru_1119, retro_ttru_1271,
Drosophila melanogaster FBgn0031636 ortholog_one2many 1 retrogene
retro_dmel_45,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_1210 77.55 90.75
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Download FASTA sequences of all ENSMMUG00000023510 retrocopies