Parental gene: | SGOL1, ENSDNOG00000008694 |
| Aliases: | None |
| Description: | shugoshin-like 1 (S. pombe) [Source:HGNC Symbol;Acc:25088] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | scaffold_42287:4281..13420(+) |
>ENSDNOG00000008694
ATGGCCAAGGAAAGGTGCCTTAAAAAGTCCTTTCAGGACAGTCTTGAAGACATAAAGAAACGAATGAAAGAGAAAAGGAA
TAAAAACTTGGAAGAAATTGGCAAGCGCAAGTCTTTGATAGCTGCCCCGTGCCAAGTAATCAACAGCACTTCTACACTCC
TGAAAAATTACCAGGACAACAATAGAATGTTAGTTTTAGCTTTGGAAAATGAAAAATCCAAAGTGAGAGAAGCCCAAGAT
ATCATCCTAGAGCTCAGAAAAGAATGTTATTACCTCACATGCCAGCTCTATGCATTGAAAGAAAAACTTACTTCACAAGA
AACTGAAGAACCTGCTCAGAGTCTGGAAGTATGTCCCTCTGGAATGGACTCCATTAGTAATGACAACTCCAGGGAATTAT
TTGTGAAGGATTTACGGCAAAGTCCTCTTCAGGAAGCTGGCCCTCGAGGACAGGAAGAGTCATTCCAAAGAGAAGAGCAA
ACTCCTACTGTTTCAGACAGATTGGGATTTGATTTTGAGTCAAGTGAAGATAAGCCTACTGATCATGTCTTACCTAGAAC
TGTATCTGTTCGTCACAATTTAAAAAAGCGTTTTAACAGTCTATGCCAATTTGATGCTGTGGATAACTTTGAAACCAGTC
ATTTGACTGTAGAATCTTTTAAATTAGAAAGAATTCGCTTTGCTGACCCATTTATAAATCTACACATATCTGAAAATGTA
GACCAAAACATTTCTCAGGGGAACAAGGACCAAATTAACTTACCACCAAAACCGATTTACCCAGCAAGTCTTAGTAAAGC
AAAAGAAGTCATTTTAGAGTCTAAATCTGAGCAAACTAAAACTAAGCGTATAGATGCACAAAGAAGAAAAAGAGAAAAAA
GAAAAGTGAACAGAAGAAGAAAATCAAAGTATATATCAAGATATAAAGGGAACAAGAATGAAAGTAAAAAAACTGTTTCT
GAAAAAAAATTGGATGAACTTCTCCATGCCAGTGATGCTTACAATTTTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNG
TGCACCACCTGAAACTCACCAGTCAGCTCATCTTGGCCTGAAGGACATCACCAATGTCTCCTTGTCTCCTGCAGTGAAAA
TCAGAAAACTTTCTCTTTCTCCAAAAAAGAGTAAAGAAAGCCCAGCAGCTTCTCTGCGTAAGCGCAGGTGCACAGCCATT
GTGAACTATAAGGAACCCACTCTCGCTTCGAAATTGAGAAGAGGAGACCCTTTTACAGATTTGTGTTTCTTGAATTCTCC
TATTTTCAAGACAAAAAAGGACTCCAGACGCAGTTCTAAAAAA
ATGGCCAAGGAAAGGTGCCTTAAAAAGTCCTTTCAGGACAGTCTTGAAGACATAAAGAAACGAATGAAAGAGAAAAGGAA
TAAAAACTTGGAAGAAATTGGCAAGCGCAAGTCTTTGATAGCTGCCCCGTGCCAAGTAATCAACAGCACTTCTACACTCC
TGAAAAATTACCAGGACAACAATAGAATGTTAGTTTTAGCTTTGGAAAATGAAAAATCCAAAGTGAGAGAAGCCCAAGAT
ATCATCCTAGAGCTCAGAAAAGAATGTTATTACCTCACATGCCAGCTCTATGCATTGAAAGAAAAACTTACTTCACAAGA
AACTGAAGAACCTGCTCAGAGTCTGGAAGTATGTCCCTCTGGAATGGACTCCATTAGTAATGACAACTCCAGGGAATTAT
TTGTGAAGGATTTACGGCAAAGTCCTCTTCAGGAAGCTGGCCCTCGAGGACAGGAAGAGTCATTCCAAAGAGAAGAGCAA
ACTCCTACTGTTTCAGACAGATTGGGATTTGATTTTGAGTCAAGTGAAGATAAGCCTACTGATCATGTCTTACCTAGAAC
TGTATCTGTTCGTCACAATTTAAAAAAGCGTTTTAACAGTCTATGCCAATTTGATGCTGTGGATAACTTTGAAACCAGTC
ATTTGACTGTAGAATCTTTTAAATTAGAAAGAATTCGCTTTGCTGACCCATTTATAAATCTACACATATCTGAAAATGTA
GACCAAAACATTTCTCAGGGGAACAAGGACCAAATTAACTTACCACCAAAACCGATTTACCCAGCAAGTCTTAGTAAAGC
AAAAGAAGTCATTTTAGAGTCTAAATCTGAGCAAACTAAAACTAAGCGTATAGATGCACAAAGAAGAAAAAGAGAAAAAA
GAAAAGTGAACAGAAGAAGAAAATCAAAGTATATATCAAGATATAAAGGGAACAAGAATGAAAGTAAAAAAACTGTTTCT
GAAAAAAAATTGGATGAACTTCTCCATGCCAGTGATGCTTACAATTTTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNG
TGCACCACCTGAAACTCACCAGTCAGCTCATCTTGGCCTGAAGGACATCACCAATGTCTCCTTGTCTCCTGCAGTGAAAA
TCAGAAAACTTTCTCTTTCTCCAAAAAAGAGTAAAGAAAGCCCAGCAGCTTCTCTGCGTAAGCGCAGGTGCACAGCCATT
GTGAACTATAAGGAACCCACTCTCGCTTCGAAATTGAGAAGAGGAGACCCTTTTACAGATTTGTGTTTCTTGAATTCTCC
TATTTTCAAGACAAAAAAGGACTCCAGACGCAGTTCTAAAAAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 10 .11 RPM |
| SRP012922_cerebellum | 2 .75 RPM |
| SRP012922_heart | 1 .39 RPM |
| SRP012922_kidney | 3 .01 RPM |
| SRP012922_liver | 0 .93 RPM |
| SRP012922_lung | 7 .79 RPM |
| SRP012922_quadricep_muscle | 0 .52 RPM |
| SRP012922_spleen | 27 .93 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000013948 | ortholog_one2one | 1 retrogene | |
| Equus caballus | ENSECAG00000012475 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000023940 | ortholog_one2one | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000022499 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_1045 | 87.78 | 51.44 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSDNOG00000008694 retrocopies