Parental gene: | Sgol1, ENSMUSG00000023940 |
| Aliases: | Sgol1, 3300001M08Rik, C81037, Sgo1 |
| Description: | shugoshin-like 1 (S. pombe) [Source:MGI Symbol;Acc:MGI:1919665] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 17:53674785..53689333(-) |
>ENSMUSG00000023940
ATGGCTAAGGAAAGGTGTCAGAAAAGGTCCTTTCAAGATACCCTTGAAGACATTAAGAATCGAATGAAAGAAAAAAGGAA
TAAAAATTTGGCGGGGATTGGGAAACGCAAGTCCTTTATTGTTGCACCGGGCCAAGTACCCACTAACACTGCTACACTAC
TGAGATATTACCAAGATAACAACAGGTTGTTAGTCTTGGCTTTGGAAAATGAGAAATCCAAAGTGAGAGAAGCACAGGAT
GTCATCCTGCAACTGAGAAAAGAATGCTACTACCTTACTTGTCAGCTGTATGCATTGAAAGAGAAGCTAACTTCCCGACA
AAGTGAAGAAACTACTCAGAACTGGAAAGGACGTCCCTCAGACGTGGTCTCCAGCATTGACAATACGACCAGGGACTTGT
CAGGGAAGTCCTTACAGCAAATTGCTGTTGAAGAAACTGATTGTCCTTACCAAACCACAGAACCAAGTCCTGCTGTTACT
CCAGAGACACAGGGTTGCGATTTTGATTCAGGTAAAGTTGAGTCTACTGATGAAGTCTTACCCAGAACTATATCTATCCG
TCGCCATTTAAGGAAAGATTTTAGTAATATAAGCCACTCCACGACTTTGGAGGATTGTAAAGCCAGTCCAAGAGTGGCAC
AGTCTCTGGAAGTTAAAGGAAGTAGATGTAGAGAAGTAACCGTAACCCTGCACAGACTTGAAAATGTTTGTCTGTGGAAC
AAAGACCAAATTAGCTTATGTTCTAGACTGATTAACCCAGCAAAGATTACTGAAACAGAAGTCATTTTATCATCTAAACC
TGAACAAATAGAAAGCAAGCATAAACGTGCACGAAAAAGAAGAGCAGAGCAAAGAAGAACCAAGCAGAGATGCAAATCAA
AATCCTCATTGAGGAGTAAGGGGAACAAAAACAAAGATAAGCAGGGTTTACCCCCTACTACACTGGATGGAGGTATTGGT
TCCTGTGATGCTTACGATTTTAATCTAAAAGGGACGGTCCACCCCACCCCTTTCCGACAAAAAATGAACAATGGCTGCAA
CAAAGAAACGGATAGCAGCAACTCAGAAGTGAGTGACCTCGAATGCAGTACCTCTGAGGATGAGTCTGATGACCTCTACC
TGCCTCCCTCCAAGCGCTTGCGAGACTACAGAGAGTCAGAGAGAGCAGTTACCAGGCCTCGGTCTAAAAGAGGACTTCAG
TACCCAGATGGGAAAGAGAGGAAGGAGGTGCTGCCATCTACAGCTCCTACTGGTATCCCACCTGAGACTCAAGAGTCACC
TCGTTGTAGCCTAAAGGATGTCACCAATATCCTGCAGTGTCCTAGAGTGAAGATCAGGAAGCCTTCTCTGCCTCCAAAGC
GGCGTGAAGACAGCCCAGCAGTGGCTCTGACTAAACGCAGGTGTAGCACCATCAAAAGCTATAAAGAGCCAACACTCGCT
TCAAAGCTAAGAAGAGGGGACCCTTTCACGGACTTGTGTTTCTTGAATTCTCCTATTTTCAAGCAGAAAAGGGGTATGAG
ATGTCCTAAAAGAAGAACCAAGCAAACACAGTAA
ATGGCTAAGGAAAGGTGTCAGAAAAGGTCCTTTCAAGATACCCTTGAAGACATTAAGAATCGAATGAAAGAAAAAAGGAA
TAAAAATTTGGCGGGGATTGGGAAACGCAAGTCCTTTATTGTTGCACCGGGCCAAGTACCCACTAACACTGCTACACTAC
TGAGATATTACCAAGATAACAACAGGTTGTTAGTCTTGGCTTTGGAAAATGAGAAATCCAAAGTGAGAGAAGCACAGGAT
GTCATCCTGCAACTGAGAAAAGAATGCTACTACCTTACTTGTCAGCTGTATGCATTGAAAGAGAAGCTAACTTCCCGACA
AAGTGAAGAAACTACTCAGAACTGGAAAGGACGTCCCTCAGACGTGGTCTCCAGCATTGACAATACGACCAGGGACTTGT
CAGGGAAGTCCTTACAGCAAATTGCTGTTGAAGAAACTGATTGTCCTTACCAAACCACAGAACCAAGTCCTGCTGTTACT
CCAGAGACACAGGGTTGCGATTTTGATTCAGGTAAAGTTGAGTCTACTGATGAAGTCTTACCCAGAACTATATCTATCCG
TCGCCATTTAAGGAAAGATTTTAGTAATATAAGCCACTCCACGACTTTGGAGGATTGTAAAGCCAGTCCAAGAGTGGCAC
AGTCTCTGGAAGTTAAAGGAAGTAGATGTAGAGAAGTAACCGTAACCCTGCACAGACTTGAAAATGTTTGTCTGTGGAAC
AAAGACCAAATTAGCTTATGTTCTAGACTGATTAACCCAGCAAAGATTACTGAAACAGAAGTCATTTTATCATCTAAACC
TGAACAAATAGAAAGCAAGCATAAACGTGCACGAAAAAGAAGAGCAGAGCAAAGAAGAACCAAGCAGAGATGCAAATCAA
AATCCTCATTGAGGAGTAAGGGGAACAAAAACAAAGATAAGCAGGGTTTACCCCCTACTACACTGGATGGAGGTATTGGT
TCCTGTGATGCTTACGATTTTAATCTAAAAGGGACGGTCCACCCCACCCCTTTCCGACAAAAAATGAACAATGGCTGCAA
CAAAGAAACGGATAGCAGCAACTCAGAAGTGAGTGACCTCGAATGCAGTACCTCTGAGGATGAGTCTGATGACCTCTACC
TGCCTCCCTCCAAGCGCTTGCGAGACTACAGAGAGTCAGAGAGAGCAGTTACCAGGCCTCGGTCTAAAAGAGGACTTCAG
TACCCAGATGGGAAAGAGAGGAAGGAGGTGCTGCCATCTACAGCTCCTACTGGTATCCCACCTGAGACTCAAGAGTCACC
TCGTTGTAGCCTAAAGGATGTCACCAATATCCTGCAGTGTCCTAGAGTGAAGATCAGGAAGCCTTCTCTGCCTCCAAAGC
GGCGTGAAGACAGCCCAGCAGTGGCTCTGACTAAACGCAGGTGTAGCACCATCAAAAGCTATAAAGAGCCAACACTCGCT
TCAAAGCTAAGAAGAGGGGACCCTTTCACGGACTTGTGTTTCTTGAATTCTCCTATTTTCAAGCAGAAAAGGGGTATGAG
ATGTCCTAAAAGAAGAACCAAGCAAACACAGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 0 .14 RPM |
| SRP007412_cerebellum | 0 .74 RPM |
| SRP007412_heart | 0 .25 RPM |
| SRP007412_kidney | 0 .46 RPM |
| SRP007412_liver | 0 .27 RPM |
| SRP007412_testis | 1 .33 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000013948 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000008694 | ortholog_one2one | 1 retrogene | |
| Equus caballus | ENSECAG00000012475 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000022499 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_867 | 72.62 | 81.82 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmus_3486 | 87.68 | 54.93 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000023940 retrocopies