Parental gene: | LIX1, ENSDNOG00000012335 |
| Aliases: | None |
| Description: | Lix1 homolog (chicken) [Source:HGNC Symbol;Acc:18581] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_3966:9391..102516(-) |
>ENSDNOG00000012335
ATGGACAGAACCTTGGAATCCCTGAGACACATCATTGCCCAAGTCTTGCCTCACAGAGACCCAACTCTGGTCTTCAAAGA
CTTGAATGTTGTGTCAATGTTACAGGAATTTTGGGAAAGCAAGCAGCAGCAGAGGGCTGCATTTCCAAGTGAAGGCATAG
TGGTCTATGAGTCGCTGCCTTCTCCGGGACCTCCCTTTGTGAGTTACGTGACCCTCCCAGGGGGGAGCTGTTTTGGCAAC
TTTCAGTGCTGCTTAAGTAGAGCTGAGGCCAGACGGGATGCTGCAAAAGTGGCCCTGATCAATTCCCTCTTCAATGAGCT
GCCCTCTCGCAGGATCACCAAGGAATTCATTATGGAAAGTGTTCAGGAAGCAGTTGCCTCCACCAGCGGCACATTAGATG
ACGCTGATGACCCCAGCACCAGCATTGGAGCCTACCACTACATGTTGGAGTCAAACATGGGGAAAACCATGCTGGAATTT
CAGGAGCTGATGACCATTTTCCAACTATTGCATTGGAACGGAAGCCTAAAAGCCCTCCGTGAAACAAAGTGCTCCCGACA
GNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATGGCCCTGGACTGGATCATGAAGC
GAGAGTCGCCAGGAATCCTTTCTCAAGAGCTGCGAATGGTCCTGAGAGAGTTGGAGGAAGCCAGGAAAGCAGGGCAAGAA
CTCCGGTTTTACAAAGAGAAGAAAGAAATCGTGAGCTTAGCTCTGACTCAGATCTACAATGACGCCGACATTGCCGCACC
CAGTGATGATCAGCTGAGCCTCAGGGCCCTGTGTGGCTATCACTAG
ATGGACAGAACCTTGGAATCCCTGAGACACATCATTGCCCAAGTCTTGCCTCACAGAGACCCAACTCTGGTCTTCAAAGA
CTTGAATGTTGTGTCAATGTTACAGGAATTTTGGGAAAGCAAGCAGCAGCAGAGGGCTGCATTTCCAAGTGAAGGCATAG
TGGTCTATGAGTCGCTGCCTTCTCCGGGACCTCCCTTTGTGAGTTACGTGACCCTCCCAGGGGGGAGCTGTTTTGGCAAC
TTTCAGTGCTGCTTAAGTAGAGCTGAGGCCAGACGGGATGCTGCAAAAGTGGCCCTGATCAATTCCCTCTTCAATGAGCT
GCCCTCTCGCAGGATCACCAAGGAATTCATTATGGAAAGTGTTCAGGAAGCAGTTGCCTCCACCAGCGGCACATTAGATG
ACGCTGATGACCCCAGCACCAGCATTGGAGCCTACCACTACATGTTGGAGTCAAACATGGGGAAAACCATGCTGGAATTT
CAGGAGCTGATGACCATTTTCCAACTATTGCATTGGAACGGAAGCCTAAAAGCCCTCCGTGAAACAAAGTGCTCCCGACA
GNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATGGCCCTGGACTGGATCATGAAGC
GAGAGTCGCCAGGAATCCTTTCTCAAGAGCTGCGAATGGTCCTGAGAGAGTTGGAGGAAGCCAGGAAAGCAGGGCAAGAA
CTCCGGTTTTACAAAGAGAAGAAAGAAATCGTGAGCTTAGCTCTGACTCAGATCTACAATGACGCCGACATTGCCGCACC
CAGTGATGATCAGCTGAGCCTCAGGGCCCTGTGTGGCTATCACTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 0 .78 RPM |
| SRP012922_cerebellum | 1 .92 RPM |
| SRP012922_heart | 0 .00 RPM |
| SRP012922_kidney | 0 .00 RPM |
| SRP012922_liver | 0 .00 RPM |
| SRP012922_lung | 0 .00 RPM |
| SRP012922_quadricep_muscle | 0 .17 RPM |
| SRP012922_spleen | 0 .00 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Equus caballus | ENSECAG00000021643 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000047786 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_2085 | 51.27 | 82.92 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSDNOG00000012335 retrocopies