Parental gene: | LIX1, ENSECAG00000021643 |
| Aliases: | None |
| Description: | Lix1 homolog (chicken) [Source:HGNC Symbol;Acc:18581] |
| Organism: | Horse (Equus caballus) |
| Coordinates: | 14:71713308..71758939(+) |
>ENSECAG00000021643
ATGGACAGAACCTTGGAATCCCTGAGACACATCATTGCCCAAGTCTTGCCTCACAGAGACCCAGCTCTAGTCTTCAAAGA
CTTGAATGTAGTGTCAATGTTACAGGAATTTTGGGAAAGCAAGCAGGAGAGGGCTGCGTTCCCAAGTGAAGGAGTGGTGA
TCTATGAGTCACTGCCATCTCCTGGGCCTCCCTTCGTGAGTTACGTGACCCTCCCAGGAGGAAGCTGCTTTGGCAACTTT
CAGTGCTGCTTAAGTAGAGCTGAGGCCAGACGGGATGCAGCGAAAGTGGCCCTAATCAACTCCCTCTTCAATGAGCTGCC
CTCTCGCAGGATCACCAAGGAATTCATAATGGAGAGTGTGCAGGAAGCGGTTGCCTCCACCAGCGGCACACTGGACGACG
CAGACGACCCCAGCACCAGCATCGGGGCCTATCACTACATGCTGGAGTCGAACATGGGGAAGACCATGCTGGAATTTCAG
GAGCTGATGACCATTTTCCAACTACTGCACTGGAACGGGAGCCTGAAAGCCCTTCGTGAAACCAAGTGTTCCCGACAGGA
AGTCATCTCCTACTATTCCCAGTATTCCCTAGATGAAAAGATGCGCAGCCACATGGCCCTGGACTGGATCATGAAGGAGC
GGGAATCGCCAGGAATTCTCTCTCAAGAACTACGAATGGCCCTGAGGGAGTTGGAGGAAGCCAGGAAAGCAGGACAAGAA
CTACGGTTTTACAAAGAAAAGAAAGAAATCCTGAGTTTAGCCCTGACTCAGATCTACAGCGAGTCTGACACTTCCTCACC
CAGTGATGATCAGCTGAGCCTCACGGCCCTTTGTGGCTATCACTAG
ATGGACAGAACCTTGGAATCCCTGAGACACATCATTGCCCAAGTCTTGCCTCACAGAGACCCAGCTCTAGTCTTCAAAGA
CTTGAATGTAGTGTCAATGTTACAGGAATTTTGGGAAAGCAAGCAGGAGAGGGCTGCGTTCCCAAGTGAAGGAGTGGTGA
TCTATGAGTCACTGCCATCTCCTGGGCCTCCCTTCGTGAGTTACGTGACCCTCCCAGGAGGAAGCTGCTTTGGCAACTTT
CAGTGCTGCTTAAGTAGAGCTGAGGCCAGACGGGATGCAGCGAAAGTGGCCCTAATCAACTCCCTCTTCAATGAGCTGCC
CTCTCGCAGGATCACCAAGGAATTCATAATGGAGAGTGTGCAGGAAGCGGTTGCCTCCACCAGCGGCACACTGGACGACG
CAGACGACCCCAGCACCAGCATCGGGGCCTATCACTACATGCTGGAGTCGAACATGGGGAAGACCATGCTGGAATTTCAG
GAGCTGATGACCATTTTCCAACTACTGCACTGGAACGGGAGCCTGAAAGCCCTTCGTGAAACCAAGTGTTCCCGACAGGA
AGTCATCTCCTACTATTCCCAGTATTCCCTAGATGAAAAGATGCGCAGCCACATGGCCCTGGACTGGATCATGAAGGAGC
GGGAATCGCCAGGAATTCTCTCTCAAGAACTACGAATGGCCCTGAGGGAGTTGGAGGAAGCCAGGAAAGCAGGACAAGAA
CTACGGTTTTACAAAGAAAAGAAAGAAATCCTGAGTTTAGCCCTGACTCAGATCTACAGCGAGTCTGACACTTCCTCACC
CAGTGATGATCAGCTGAGCCTCACGGCCCTTTGTGGCTATCACTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP021940_synovial_membrane | 0 .66 RPM |
| SRP021940_embryo | 25 .11 RPM |
| SRP021940_cerebellum | 0 .47 RPM |
| SRP021940_testis | 0 .00 RPM |
| SRP021940_placental_villous | 0 .05 RPM |
| SRP021940_articular_cartilage | 0 .00 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Dasypus novemcinctus | ENSDNOG00000012335 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000047786 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ecab_1013 | 63.77 | 92.88 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSECAG00000021643 retrocopies