Parental gene: | VTCN1, ENSDNOG00000013317 |
| Aliases: | None |
| Description: | V-set domain containing T cell activation inhibitor 1 [Source:HGNC Symbol;Acc:28873] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | scaffold_17559:36529..70352(-) |
>ENSDNOG00000013317
ATTATTAGCATCATAATTATTCTGGCTGGAGCCATTGCACTCATCATTGGCTTTGGTATTTCAGGGAGACACTCCATCAC
AGTCACTACCCTCACCTCAGCTGGGAACATCGGGGAGGATGGAATACTGAGCTGTACTTTTGAACCTGACATCAGACTTT
CTGATATTGTGATACAGTGGCTGAAGGAAGGTGTTTCAGGCTTGGTCCATGAGTACAAAGCAGGCAAAGATGATCTGTCA
CACCAAGATGAAATGTTCAGGGGCCGGACAGCAGTGTTCACTGATCAAGTGATAGTTGGCAATGCCTCTCTGAGGCTGAA
AAATGTGCAACTCACAGATGCTGGCACATACAAATGTTACATCATCACCTCTAAGGGCAAGGGGAATGCTAATCTGGAGT
ATAAAACTGGAGCCTTCAGCGTCCCAGAGGTGAATGTGAACTATAACGCCAGTTCTGAGAGCTTGCGGTGTGAGGCGCCA
CGATGGTTCCCCCAGCCCACAGTGGTCTGGGCATCCCAAGCGGACCAGGGAGCCAACTTCTCAGAAGTCTCCACTAGCTT
TGAGCTGAACTCTGAGAACGTGACGATGAAGGTGGTGTCCGTGCTCTACAACGTCACGATCAACAACACATACTCCTGTA
TGATTGAGAACAGCATTGCCAAAGCCACAGGGGACATCAAAGTGACAGACTCGGAGATCAAAAGGCAGAGTCACTTACAA
CTGCTGAACTCAAAGGCTTCCCTGGGCGTCTCCTCTTTCTGTGCCATCAGCTGGATCCTCCTGCCTCTCTCCCCTTACCT
GATGCCAAAATAA
ATTATTAGCATCATAATTATTCTGGCTGGAGCCATTGCACTCATCATTGGCTTTGGTATTTCAGGGAGACACTCCATCAC
AGTCACTACCCTCACCTCAGCTGGGAACATCGGGGAGGATGGAATACTGAGCTGTACTTTTGAACCTGACATCAGACTTT
CTGATATTGTGATACAGTGGCTGAAGGAAGGTGTTTCAGGCTTGGTCCATGAGTACAAAGCAGGCAAAGATGATCTGTCA
CACCAAGATGAAATGTTCAGGGGCCGGACAGCAGTGTTCACTGATCAAGTGATAGTTGGCAATGCCTCTCTGAGGCTGAA
AAATGTGCAACTCACAGATGCTGGCACATACAAATGTTACATCATCACCTCTAAGGGCAAGGGGAATGCTAATCTGGAGT
ATAAAACTGGAGCCTTCAGCGTCCCAGAGGTGAATGTGAACTATAACGCCAGTTCTGAGAGCTTGCGGTGTGAGGCGCCA
CGATGGTTCCCCCAGCCCACAGTGGTCTGGGCATCCCAAGCGGACCAGGGAGCCAACTTCTCAGAAGTCTCCACTAGCTT
TGAGCTGAACTCTGAGAACGTGACGATGAAGGTGGTGTCCGTGCTCTACAACGTCACGATCAACAACACATACTCCTGTA
TGATTGAGAACAGCATTGCCAAAGCCACAGGGGACATCAAAGTGACAGACTCGGAGATCAAAAGGCAGAGTCACTTACAA
CTGCTGAACTCAAAGGCTTCCCTGGGCGTCTCCTCTTTCTGTGCCATCAGCTGGATCCTCCTGCCTCTCTCCCCTTACCT
GATGCCAAAATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 1 .36 RPM |
| SRP012922_cerebellum | 0 .00 RPM |
| SRP012922_heart | 0 .00 RPM |
| SRP012922_kidney | 0 .55 RPM |
| SRP012922_liver | 0 .00 RPM |
| SRP012922_lung | 0 .46 RPM |
| SRP012922_quadricep_muscle | 0 .00 RPM |
| SRP012922_spleen | 0 .11 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000005097 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000134258 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000025814 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000016964 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000005256 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000001164 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_1181 | 64.19 | 53.33 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSDNOG00000013317 retrocopies