Parental gene:

VTCN1, ENSG00000134258

Aliases:VTCN1, B7-H4, B7H4, B7S1, B7X, B7h.5, PRO1291, VCTN1
Description:V-set domain containing T cell activation inhibitor 1 [Source:HGNC Symbol;Acc:28873]
Organism:Human (Homo sapiens)
Coordinates:1:117686208..117753556(-)


>ENSG00000134258
ATGGCTTCCCTGGGGCAGATCCTCTTCTGGAGCATAATTAGCATCATCATTATTCTGGCTGGAGCAATTGCACTCATCAT
TGGCTTTGGTATTTCAGGGAGACACTCCATCACAGTCACTACTGTCGCCTCAGCTGGGAACATTGGGGAGGATGGAATCC
TGAGCTGCACTTTTGAACCTGACATCAAACTTTCTGATATCGTGATACAATGGCTGAAGGAAGGTGTTTTAGGCTTGGTC
CATGAGTTCAAAGAAGGCAAAGATGAGCTGTCGGAGCAGGATGAAATGTTCAGAGGCCGGACAGCAGTGTTTGCTGATCA
AGTGATAGTTGGCAATGCCTCTTTGCGGCTGAAAAACGTGCAACTCACAGATGCTGGCACCTACAAATGTTATATCATCA
CTTCTAAAGGCAAGGGGAATGCTAACCTTGAGTATAAAACTGGAGCCTTCAGCATGCCGGAAGTGAATGTGGACTATAAT
GCCAGCTCAGAGACCTTGCGGTGTGAGGCTCCCCGATGGTTCCCCCAGCCCACAGTGGTCTGGGCATCCCAAGTTGACCA
GGGAGCCAACTTCTCGGAAGTCTCCAATACCAGCTTTGAGCTGAACTCTGAGAATGTGACCATGAAGGTTGTGTCTGTGC
TCTACAATGTTACGATCAACAACACATACTCCTGTATGATTGAAAATGACATTGCCAAAGCAACAGGGGATATCAAAGTG
ACAGAATCGGAGATCAAAAGGCGGAGTCACCTACAGCTGCTAAACTCAAAGGCTTCTCTGTGTGTCTCTTCTTTCTTTGC
CATCAGCTGGGCACTTCTGCCTCTCAGCCCTTACCTGATGCTAAAATAA

Library Parental gene expression (RPM)
bodymap2_liver 0 .34 RPM
bodymap2_lung 0 .86 RPM
bodymap2_breast 15 .58 RPM
bodymap2_adipose 0 .04 RPM
bodymap2_adrenal 0 .10 RPM
bodymap2_skeletal_muscle 0 .00 RPM
bodymap2_thyroid 0 .30 RPM
bodymap2_prostate 2 .39 RPM
bodymap2_colon 0 .00 RPM
bodymap2_testis 11 .33 RPM
bodymap2_brain 0 .00 RPM
bodymap2_heart 0 .07 RPM
bodymap2_white_blood_cells 0 .00 RPM
bodymap2_lymph_node 0 .22 RPM
bodymap2_ovary 7 .60 RPM
bodymap2_kidney 15 .10 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000005097 ortholog_one2one 1 retrogene
retro_chof_1322,
Dasypus novemcinctus ENSDNOG00000013317 ortholog_one2one 1 retrogene
retro_dnov_1181,
Gorilla gorilla ENSGGOG00000025814 ortholog_one2one 1 retrogene
retro_ggor_1505,
Macaca mulatta ENSMMUG00000016964 ortholog_one2one 1 retrogene
retro_mmul_611,
Nomascus leucogenys ENSNLEG00000005256 ortholog_one2one 1 retrogene
retro_nleu_2811,
Pan troglodytes ENSPTRG00000001164 ortholog_one2one 1 retrogene
retro_ptro_1394,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_2420 88.73 97.16
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSG00000134258 retrocopies