Parental gene: | VTCN1, ENSMMUG00000016964 |
| Aliases: | None |
| Description: | V-set domain containing T cell activation inhibitor 1 [Source:HGNC Symbol;Acc:28873] |
| Organism: | Rhesus macaque (Macaca mulatta) |
| Coordinates: | 1:120117049..120188172(-) |
>ENSMMUG00000016964
TTGGTCTTGCTGACTTCAAGAATGAAGCCACTGACCTCTCACATAATTAGCATCATCTTTATTCTGGCTGGAGCAATTGC
ACTCATCATTGGCTTTGGTATTTCAGGGAGACACTCCATCACAGTCACTACTGTTGCCTCAGCTGGGAACATTGGGGAGG
ATGGAATCCTGAGCTGCACTTTTGAACCTGACATCAAACTTTCTGATATCGTGATACAATGGCTGAAGGAAGGTGTTATA
GGCTTGGTCCATGAGTTCAAAGAAGGCAAAGATGAGCTGTCGGAGCAGGATGAAATGTTCAGAGGCCGGACAGCAGTGTT
TGCTGATCAAGTGATAGTTGGCAATGCCTCTCTGCGGCTGAAAAATGTACAACTTACAGACGCTGGCACCTACAAATGTT
ACATCATCACTTCTAAAGGCAAGGGGAATGCTAACCTTGAGTATAAAACTGGAGCCTTCAGCATGCCAGAGGTGAATGTG
GACTATAACGCCAGCTCAGAGACCTTGCGGTGTGAGGCTCCCCGATGGTTCCCCCAGCCCACAGTGGTCTGGGCATCCCA
AGTTGACCAGGGAGCCAACTTCTCGGAAGTCTCCAATACCAGCTTTGAGCTGAACTCTGAGAATGTGACCATGAAGGTTG
TGTCTGTGCTATACAATGTTACGATCAACAACACATACTCCTGTATGATTGAAAATGACATTGCCAAAGCAACAGGGGAT
ATCAAAGTGACAGAATCTGAGATCAAAAGACGGAGTCACCTACAGCTGCTAAACTCAAAGGCTTCTCTGTGTGTCTCTTC
TTTCCTTGCCATCAGCTGGGCACTTCTGCCTCTCGCCCCTTACCTGATGCTAAAATAA
TTGGTCTTGCTGACTTCAAGAATGAAGCCACTGACCTCTCACATAATTAGCATCATCTTTATTCTGGCTGGAGCAATTGC
ACTCATCATTGGCTTTGGTATTTCAGGGAGACACTCCATCACAGTCACTACTGTTGCCTCAGCTGGGAACATTGGGGAGG
ATGGAATCCTGAGCTGCACTTTTGAACCTGACATCAAACTTTCTGATATCGTGATACAATGGCTGAAGGAAGGTGTTATA
GGCTTGGTCCATGAGTTCAAAGAAGGCAAAGATGAGCTGTCGGAGCAGGATGAAATGTTCAGAGGCCGGACAGCAGTGTT
TGCTGATCAAGTGATAGTTGGCAATGCCTCTCTGCGGCTGAAAAATGTACAACTTACAGACGCTGGCACCTACAAATGTT
ACATCATCACTTCTAAAGGCAAGGGGAATGCTAACCTTGAGTATAAAACTGGAGCCTTCAGCATGCCAGAGGTGAATGTG
GACTATAACGCCAGCTCAGAGACCTTGCGGTGTGAGGCTCCCCGATGGTTCCCCCAGCCCACAGTGGTCTGGGCATCCCA
AGTTGACCAGGGAGCCAACTTCTCGGAAGTCTCCAATACCAGCTTTGAGCTGAACTCTGAGAATGTGACCATGAAGGTTG
TGTCTGTGCTATACAATGTTACGATCAACAACACATACTCCTGTATGATTGAAAATGACATTGCCAAAGCAACAGGGGAT
ATCAAAGTGACAGAATCTGAGATCAAAAGACGGAGTCACCTACAGCTGCTAAACTCAAAGGCTTCTCTGTGTGTCTCTTC
TTTCCTTGCCATCAGCTGGGCACTTCTGCCTCTCGCCCCTTACCTGATGCTAAAATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 0 .08 RPM |
| SRP007412_brain | 0 .00 RPM |
| SRP007412_cerebellum | 0 .00 RPM |
| SRP007412_heart | 0 .00 RPM |
| SRP007412_kidney | 18 .78 RPM |
| SRP007412_liver | 0 .00 RPM |
| SRP007412_testis | 0 .11 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000005097 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000013317 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000134258 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000025814 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000005256 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000001164 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmul_611 | 84.36 | 97.16 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMMUG00000016964 retrocopies