Parental gene: | ARF5, ENSDNOG00000013387 |
| Aliases: | None |
| Description: | ADP-ribosylation factor 5 (Predicted) [Source:UniProtKB/TrEMBL;Acc:C0RW27] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | scaffold_12407:61222..63168(-) |
>ENSDNOG00000013387
GGCTTGGATGCAGCTGGCAAGACCACAATCCTATACAAACTGAAACTGGGGGAGATTGTCACGACCATCCCCACCATAGG
CTTCAATGTGGAAACGGTGGAATATAAGAACATCTGTTTCACAGTCTGGGATGTAGGAGGCCAAGACAAGATTCGGCCTC
TGTGGCGGCACTACTTCCAGAACACTCAGGGCCTCATCTTTGTGGTGGACAGTAATGACCGGGAGCGGGTCCAGGAATCT
GCTGATGAACTCCAGAAGATGCTGCAAGAGGATGAGCTGCGGGATGCGGTGCTATTGGTGTTTGCCAACAAGCAAGACAT
GCCCAACGCCATGCCCGTGAGCGAGCTGACGGACAAGCTGGGGCTACAGCACTTACGCAGCCGCACGTGGTACGTCCAGG
CCACCTGTGCCACCCAAGGCACAGGACTCTACGATGGGCTGGATTGGCTGTCCCACGAGCTGTCGAAGCGCTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 1 .75 RPM |
| SRP012922_cerebellum | 48 .94 RPM |
| SRP012922_heart | 1 .16 RPM |
| SRP012922_kidney | 3 .56 RPM |
| SRP012922_liver | 0 .77 RPM |
| SRP012922_lung | 3 .67 RPM |
| SRP012922_quadricep_muscle | 0 .35 RPM |
| SRP012922_spleen | 5 .84 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ciona intestinalis | ENSCING00000021790 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000010454 | within_species_paralog | 3 retrogenes | |
| Gorilla gorilla | ENSGGOG00000016749 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000015229 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000013336 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000006043 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_1132 | 77.14 | 88.54 | Please wait, loading  |
Please wait, loading |
Please wait, loading |
| 2. | retro_dnov_1251 | 67.26 | 69.43 | Please wait, loading |
Please wait, loading |
Please wait, loading |
| 3. | retro_dnov_1260 | 83.87 | 58.60 | Please wait, loading |
Please wait, loading |
Please wait, loading |
| 4. | retro_dnov_1407 | 54.88 | 52.23 | Please wait, loading |
Please wait, loading |
Please wait, loading |
| 5. | retro_dnov_2319 | 76.43 | 88.54 | Please wait, loading |
Please wait, loading |
Please wait, loading |
Download FASTA sequences of all ENSDNOG00000013387 retrocopies