Parental gene: | STOM, ENSDNOG00000015723 |
| Aliases: | None |
| Description: | stomatin [Source:HGNC Symbol;Acc:3383] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_4125:52155..99808(-) |
>ENSDNOG00000015723
ATGGCTGAGAAGCGGCAGGGAGCGGACACCCAAGCCCGGCGGCTCCCCGACTCCTTCAAGGATAGCCCCAATACAGGCCT
TGGACCTTGTGGATGGATTTTGGTGGCTGTCTCATTCTTATTCACGGTTATAACTTTCCCCATATCGATATGGATGTGCA
TAAAGATCATCAAAGAATATGAAAGAGCCATCATCTTTAGATTGGGTCGCATTTTACAAGGAGGAGCCAAAGGACCTGGT
TTGTTTTTTATTCTGCCATGCACTGACAACTTCATCAAAGTGGACATGAGAACTATTTCATTTGATATTCCTCCTCAGGA
GATCCTCACCAAGGACTCAGTGACAATTAGTGTGGATGGCGTAGTCTATTACCGTGTGCAGAATGCAACCCTGGCTGTGG
CAAATATCACCAATGCTGACTCAGCAACTCGTCTTTTGGCTCAGACTACTCTGAGGAATGTTCTGGGCACCAAGAACCTT
TCTCAGATCCTCTCTGACAGAGAAGAAATTGCACACAACATGCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCACCATTGCTGCTGAGAAAAACTCACCAAA
TGTCTTCCCTCTGCCCATAGATATGTTGCAGGGCATCATAGGGGCAAACCGCAGCCACATAGGCCAA
ATGGCTGAGAAGCGGCAGGGAGCGGACACCCAAGCCCGGCGGCTCCCCGACTCCTTCAAGGATAGCCCCAATACAGGCCT
TGGACCTTGTGGATGGATTTTGGTGGCTGTCTCATTCTTATTCACGGTTATAACTTTCCCCATATCGATATGGATGTGCA
TAAAGATCATCAAAGAATATGAAAGAGCCATCATCTTTAGATTGGGTCGCATTTTACAAGGAGGAGCCAAAGGACCTGGT
TTGTTTTTTATTCTGCCATGCACTGACAACTTCATCAAAGTGGACATGAGAACTATTTCATTTGATATTCCTCCTCAGGA
GATCCTCACCAAGGACTCAGTGACAATTAGTGTGGATGGCGTAGTCTATTACCGTGTGCAGAATGCAACCCTGGCTGTGG
CAAATATCACCAATGCTGACTCAGCAACTCGTCTTTTGGCTCAGACTACTCTGAGGAATGTTCTGGGCACCAAGAACCTT
TCTCAGATCCTCTCTGACAGAGAAGAAATTGCACACAACATGCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCACCATTGCTGCTGAGAAAAACTCACCAAA
TGTCTTCCCTCTGCCCATAGATATGTTGCAGGGCATCATAGGGGCAAACCGCAGCCACATAGGCCAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 82 .07 RPM |
| SRP012922_cerebellum | 1 .92 RPM |
| SRP012922_heart | 9 .75 RPM |
| SRP012922_kidney | 15 .61 RPM |
| SRP012922_liver | 57 .59 RPM |
| SRP012922_lung | 55 .29 RPM |
| SRP012922_quadricep_muscle | 5 .71 RPM |
| SRP012922_spleen | 61 .81 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Nomascus leucogenys | ENSNLEG00000017145 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000002879 | possible_ortholog | 2 retrogenes | |
| Oreochromis niloticus | ENSONIG00000013021 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_2496 | 92.05 | 60.55 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSDNOG00000015723 retrocopies