Parental gene: | CFL2, ENSDNOG00000017048 |
| Aliases: | None |
| Description: | cofilin 2 (muscle) [Source:HGNC Symbol;Acc:1875] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | scaffold_9857:49633..50421(-) |
>ENSDNOG00000017048
ATGGCTTCTGGAGTTACAGTGAATGATGAAGTCATCAAAGTTTTTAATGATATGAAAGTAAGGAAATCTTCTACACAAGA
GGAGATCAAAAAAAGAAAGAAAGCAGTTCTCTTCTGTTTAAGCGATGACAAAAGACAAATAATTGTAGAGGAAGCAAAGC
AGATCTTAGTGGGTGACATTGGTGATACTGTAGAGGACCCCTACACATCATTTGTGAAGTTGCTACCTCTGAATGATTGC
CGATATGCTTTGTACGATGCCACATACGAAACAAAAGAGTCTAAGAAAGAAGATCTAGTATTTATATTCTGGGCTCCTGA
GAGTGCACCTTTAAAAAGCAAGATGATTTATGCTAGCTCTAAAGATGCCATTAAAAAGAAATTTACAGGTAAACACGAAT
GGCAAGTAAATGGCTTGAATGATATCAAGGACCGCTCAACACTTGGAGAGAAATTGGGAGGCAAT
ATGGCTTCTGGAGTTACAGTGAATGATGAAGTCATCAAAGTTTTTAATGATATGAAAGTAAGGAAATCTTCTACACAAGA
GGAGATCAAAAAAAGAAAGAAAGCAGTTCTCTTCTGTTTAAGCGATGACAAAAGACAAATAATTGTAGAGGAAGCAAAGC
AGATCTTAGTGGGTGACATTGGTGATACTGTAGAGGACCCCTACACATCATTTGTGAAGTTGCTACCTCTGAATGATTGC
CGATATGCTTTGTACGATGCCACATACGAAACAAAAGAGTCTAAGAAAGAAGATCTAGTATTTATATTCTGGGCTCCTGA
GAGTGCACCTTTAAAAAGCAAGATGATTTATGCTAGCTCTAAAGATGCCATTAAAAAGAAATTTACAGGTAAACACGAAT
GGCAAGTAAATGGCTTGAATGATATCAAGGACCGCTCAACACTTGGAGAGAAATTGGGAGGCAAT
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 2 .14 RPM |
| SRP012922_cerebellum | 5 .36 RPM |
| SRP012922_heart | 12 .99 RPM |
| SRP012922_kidney | 0 .27 RPM |
| SRP012922_liver | 0 .00 RPM |
| SRP012922_lung | 0 .31 RPM |
| SRP012922_quadricep_muscle | 63 .52 RPM |
| SRP012922_spleen | 2 .17 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Dasypus novemcinctus | ENSDNOG00000000934 | within_species_paralog | 1 retrogene | |
| Erinaceus europaeus | ENSEEUG00000013155 | ortholog_one2one | 4 retrogenes | |
| Echinops telfairi | ENSETEG00000006010 | possible_ortholog | 3 retrogenes | |
| Latimeria chalumnae | ENSLACG00000018011 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000000739 | ortholog_one2one | 11 retrogenes | |
| Monodelphis domestica | ENSMODG00000012949 | ortholog_one2many | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000009383 | ortholog_one2one | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000004732 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000000391 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_715 | 89.41 | 54.19 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_dnov_905 | 63.87 | 74.84 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_dnov_1072 | 84.34 | 52.26 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_dnov_1379 | 70.25 | 76.13 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_dnov_1697 | 72.86 | 87.74 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_dnov_2195 | 73.43 | 90.32 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_dnov_2691 | 81.01 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSDNOG00000017048 retrocopies